Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385108
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Entry
139385108 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF166-like isoform X1
KO
K17044
E3 ubiquitin-protein ligase RNF166 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139385108
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139385108
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139385108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
zf_C2HC_14
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_6
zf-RING_5
U-box
zf-C3HC4_4
Siva
DZR_2
zf-Nse
zf-rbx1
zf-RING_4
UIM
DUF7577
zf-Sec23_Sec24
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-GeneID:
139385108
NCBI-ProteinID:
XP_070986273
LinkDB
All DBs
Position
26:complement(12653206..12669900)
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AA seq
243 aa
AA seq
DB search
MMAMFRSFVSATHQLRQHQQNGAAVAATGESLESQFSCPICLEVYHKPVTIGRCAHTFCG
ECLQPCLQVTSPLCPLCRMPFDPKKVDKSSSVEKQLSNYKAPCRGCSKKVSLVKMRSHIS
SCTKVQEQMANCPKFVPVVPTSQPIPSNVPNRSTFSCPFCGARNLDQQELVKHCMENHRN
DPNKVVCPVCSAMPWGDPSYKSSNFLQHLLHRHKFSYDTFVDYSIDEESSLQAAMALSCQ
IKC
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgatgtttcgcagttttgtgtcggctactcatcagctcaggcagcatcaacaa
aacggggcagccgtggctgccactggcgagagtctcgagagccagttctcctgcccaatt
tgcctggaggtgtatcataaacctgtcaccattggaagatgtgcccacacgttctgtggg
gagtgtctgcagccttgtctccaggtcacctctcccctctgccctctgtgccgcatgcct
tttgacccaaagaaggtggacaagtcctccagtgtggagaaacagctgtccaactacaag
gccccctgtcggggctgcagcaagaaggtgtctctggtcaaaatgaggtcacacatctcc
tcttgcacaaaggtccaggaacagatggccaactgcccaaagtttgtgcctgtggtcccc
acttcacagcccattcccagcaatgttccaaaccgctccaccttttcatgcccgttctgt
ggagcccgcaatctggaccaacaggagctggtcaaacactgtatggagaaccaccgcaac
gatcccaacaaagtggtgtgtcctgtatgttcagccatgccctggggggaccccagctac
aagagctccaacttcctccagcacctgctccaccggcacaagttctcctacgacacgttt
gtggactacagcattgacgaggagtcatcactgcaggcagccatggccctgtcctgtcaa
atcaaatgttaa
DBGET
integrated database retrieval system
