Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385131
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Entry
139385131 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
ocla04144
Endocytosis
ocla04530
Tight junction
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139385131
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139385131
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
HECT type E3
139385131
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
139385131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139385131
NCBI-ProteinID:
XP_070986306
LinkDB
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Position
26:18809850..18851647
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AA seq
1217 aa
AA seq
DB search
MARRLRLHFASRRSNTDPLSERLSSHGEESGLCVSTRSPAEILAHSSVQMKVIPGKLALA
LPPLSPEYGNLQRYSSVFIPKVNTVSKKSTLQISLQPRGKLNGELENSTEGGEPGVCEVG
AGSGSDGVSCSSSTASDAGYCSSSSSSIFEPEFPDQRRASHERSLPCRKARVPLRRCSSL
VIFPRSPCNTPPASPVSPVALPALPLARGSYQTSHQLQLSPSEPPQEDETGTSKASIATA
MNGLRLSRSSFPSAEFRDARPMVHFNIPLPDKPKDKMEECEKTDHSATLDRPCRDKADLS
ANLDQHSSVLLHFAHQRPMSGKASRNRTTVNVECPESPTKAPQSEGECGPRHIKLFRSTS
ACFLPSTKLSERSHIAGLADNGNGQEMPEENHCHHALQRSFSLEVPYHNTGISCHVTNQT
LSNFPHVHIHVSHGSGARVSSPVIDINTNHKRDHMQKSPARKTTTRDDFLGQVDVPLHQI
PTENPNIERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTEDMDPSWEFL
EGQDMSGPRHNHLLPAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSQVEAEQRQN
IHMEAQHAFTARRQISDQEDSNDRHESPELQGPSSHSSHSSRRGSAQTLTVEEHPVHPVL
LATSAGLPPGWEEKQDSKSRPYYVNHNSRITTWTRPLIQITSEAAAQALLSQNATVYQPP
MLPPEGSPQHSPGSQRECGFMPAGWEVRNAPNGKPFFIDHNTKTTSWEDPRLKIPVHMRR
RPSLDPTDLGPMPPGWEERVHSDGRIFYIDHNTKNTQWDDPRLQNSAITGPAVPYSRDYK
QKYEYFRKKMKKPADIPNRFEMKLRRNAVLEDSYRRILSIKRADFLKARLWVEFEGEKGL
DYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAG
MAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSEYFNSLKWILENDPIDLDLRFTID
EELFGQTHQHELKPGGSEIVVTDDNKKEYIHLVMQWRFVNRILKQMTAFKEGFYELIPQD
LIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYCPNQPVILWFWKTVLLMDAEKRIRL
LQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFNRLDLPPYESFEELR
EKLHIAIENAQGFDGVD
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcggctccgcttgcactttgcatcgagaagaagcaacacggatcctctgtca
gagagactgagcagccatggtgaggagagcggtctctgtgtgtcaacccgcagccccgca
gagatcctagcgcacagctctgtccaaatgaaggtgattccagggaagctagccttggct
ttgcctcccctgtccccggaatacggtaatttacagcgctactcatccgtatttataccc
aaggtgaacaccgtcagcaagaagagtactctgcagatctccctgcagccccgtggcaag
ctgaatggagagctggagaacagcactgagggcggggagccaggggtctgcgaggtggga
gcaggcagtggctcagacggggtatcctgtagcagcagcacggccagcgacgcaggctac
tgcagcagcagcagcagcagcatctttgagccagagttcccagatcagcgtagggcatcc
catgagagaagtctgccctgtaggaaagccagggtccccctgagacgctgctcatccctg
gttatatttccaaggagcccctgtaatacaccaccagcctccccggtcagccctgtggca
ctacccgccctgcctctagccaggggctcctaccagacttctcaccagctccagttgtcc
cccagtgagcccccgcaagaggacgagacggggacctcaaaagcgtccatcgccacggcg
atgaacggcctgcgactctctaggagcagctttccgtcagcggagttcagagacgctagg
cccatggtgcattttaacattccccttccagataaacctaaagacaaaatggaggagtgt
gagaagactgaccactcggctaccttagacagaccgtgtcgcgacaaggccgacctatca
gcaaatttagaccaacactccagtgtgctactgcactttgcccaccagcgaccaatgtct
gggaaggcatctagaaacagaacaacagtcaatgttgaatgtcctgaatctccaaccaag
gcccctcagtcggagggtgaatgtggccctcgccacattaagctgtttcgcagcacctct
gcttgctttctcccctcaactaaactttcagagaggagccacattgccggactcgcagac
aatggaaatggacaggaaatgcctgaggaaaaccattgtcatcacgccttacaaaggagc
ttttctctggaagtcccctaccataatactggtatttcatgtcacgttaccaaccaaaca
ctatctaactttccacatgtgcacatccatgtgtcccacggctctggggcaagggtctct
agccctgtcattgatataaacactaaccacaaaagggatcacatgcaaaagagccctgca
agaaagaccacgacacgtgatgactttctggggcaggtggacgtgccattacaccagata
ccgacagaaaatcctaacattgaaaggccatacacattcaaggattttctacttcacccg
agaagtcacaaatccagggtcaagggtcatctccgtctgaagatgacctacctacccaaa
aacaactcagaggatgctgcagaacagactgaagacatggatcctagctgggagtttcta
gagggccaggacatgtccggtcccaggcacaaccacctgctgcctgcaatgccccctggc
tgggaggagaggcaggacaacctgggcaggacctactatgtcaaccacgaaaccaggacg
acacagtggcacaggcccatagtacaagacagccaggtggaggcagagcaaaggcagaac
atccacatggaggcccagcacgccttcaccgcccgcaggcagatctccgaccaagaggac
tccaacgacagacacgagtctcctgagctgcagggcccttccagtcattcaagtcactcc
agtcgcagaggcagtgcccagactctgaccgtagaggaacaccctgttcatcctgtgttg
ttagcaacctcagcagggctgcctccaggctgggaggagaagcaggatagtaagagcaga
ccctactacgttaatcacaacagcaggattaccacttggacacggccactcatccagata
acctcagaggcagcagcccaggctcttctgtcccagaacgccactgtgtaccagcccccc
atgctccctcctgagggctccccccagcactcccccggctcacagagggagtgtggcttc
atgcctgcgggctgggaggtccgcaatgccccaaacggaaaacccttcttcatcgaccac
aacactaagaccacttcctgggaagaccccagattgaagattcctgtgcacatgaggagg
agaccttcgctagacccaactgacctcgggccaatgccgcctggctgggaggagagggtc
cacagtgatgggaggatattctacatagatcacaatacgaagaacacacaatgggatgat
cccagattgcagaattcagccataactggaccagctgtgccttactccagagactataaa
cagaagtatgaatacttccggaagaagatgaagaaaccggctgacatccccaaccgcttt
gagatgaagctcaggcggaacgccgtgctagaggactcctacagacgaatcctgtcaatc
aagagggccgacttcctgaaggctcggctgtgggtggagtttgagggagagaagggcttg
gattacggtggcgtggccagggagtggttcttcctcatttccaaggagatgttcaacccc
tattatgggctgtttgagtattctgccacagacaactacactctgcagatcaaccccaac
tcaggcctctgcaatgaggaccacctgtcctacttcaagttcattggccgtgtagcaggc
atggctgtctaccatggcaagctgctggatgccttcttcatcaggcctttctataagatg
atgttgcagaagcccattactctacaggacatggagtctgtggacagtgagtacttcaac
tccctgaagtggatattggagaatgacccgatagacctggatctgaggttcaccatagac
gaagagctctttggacagacacaccagcatgagctgaagccaggaggatctgaaatagtc
gtcaccgatgacaacaagaaggaatacatccatcttgtcatgcagtggaggttcgtgaac
aggatactgaagcagatgaccgcattcaaggagggattctatgagttgataccccaggat
ctcatcaagatatttgacgagaatgagctggagctcctgatgtgtggcctgggagacgtg
gatgtgaacgactggagggagaacaccaagtacaagaatggctactgtcccaaccagcct
gtcatcctgtggttctggaagactgttctgctgatggatgcagagaagcgtatccgcctg
ttgcagtttgtgactggcacctcccgggtcccaatgaatggctttgcagagctctacggg
tctaacggaccacagctgtttaccattgagcagtggggaacacgagacaaactacccaga
gcccacacatgcttcaaccggctggatctgcctccctatgagtcatttgaggagctgagg
gagaagctacacatcgccatagagaatgcacaaggctttgatggagtagattag
DBGET
integrated database retrieval system
