Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385228
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Entry
139385228 CDS
T10872
Name
(RefSeq) unconventional myosin-IXAa-like isoform X1
KO
K10360
myosin IX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139385228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139385228
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139385228
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139385228
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139385228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
RhoGAP
RA
IQ
C1_1
IQ_SCN5A_C
RA_2
nSTAND3
AAA_22
NPHP3_N
AAA_19
DUF1843
AAA_16
Motif
Other DBs
NCBI-GeneID:
139385228
NCBI-ProteinID:
XP_070986446
LinkDB
All DBs
Position
26:complement(37738077..37897029)
Genome browser
AA seq
2767 aa
AA seq
DB search
MSARDGGHGGGIGGVGTLGRRGRYEDSEFTLRIYPGSLAEGTIYCPVSARKSTTAAEAIE
RCLERLRLDRDRCYVLAEVKEFGGEEWILNPSDCPVQRMMLWPRGALEQRSGSGGGEDYR
FLLRQKNLDGSIHYGGSLQMWLRVTEERRRMTERGLLPQEEVRGDHADLCCLPELNERSL
LDNLRSRFRQERIYTYVGSILIVINPFQFLPIYNPKYVKMYDNHALGDLEPHIYAVADVA
YHAMLQRRRNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAF
GNAKTAHNNNSSRFGKFIQVNYQESGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLL
AGASEEERSTFHLKKPEEYHYLNQMTKKVLRLHWENYYESEADCFTVEGEDLKHDFERLQ
LAMEMVGFLPATRKQIFSLLSAILHLGNIRYKKKTYRDDSIDICNPEVLPTVSELLEVKE
EMLFEALTTRKTMTVGERLIVPYKLPEAGTVRDSMAKSLYSALFDWIVFRINHALLNNRD
LEESAKIFSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKLEQEEYRAEGIS
WHNIDYIDNTGCINLISKKPTALLHLLDEESNFPQASNQTLLDKFKRQHEGNGYIEFPAV
MEPAFIIRHYAGKVKYGVKDFREKNTDHMRPDIVALLKSSKNAFICGLMGIDPPATFRWA
VLRAFFRAMVAFRESGKRHVHRKTGHDAAAPCAVLCSVDSFSFLHHPVHQRSLEILQRCK
EEKYSVVRKSLRTPLSDLQGSNTLNEKSPRDGVGWNGRGGRQSRLSSSGSNTEEDGGIFV
NSTSSKLLERAHGILMRNKNYKSKPSLPKHLLDVKSLKYLSNLTLHDRITKSLLHLHKKK
KPPSISAQFQASLNKLMETLGQSEPYFVKCIRSNAEKLPLRFNEGLVLRQLRYTGMLETV
RIRQSGYSIKYTFQDFIRHFHVLLPEGTSATQEGIGQYLGQVDLAPDGYQVGKTMVFLRE
VERQRLQALLHREVLNRIVTLQRRFRALLERKHFTRMRLAATAIQKWWRAYQSKQEDDYD
PSIQEGAALCIQTAWRGYKERWRFGLWREAALLLQREWRALLKRREREGAALAIQTAWRC
HMAREAYLRLRGTMTLLQAVGKGYLARQSFGHLKEQRLREKEQRLRERESQQQQQQLLQN
GQTRLSPEEDDLPVRIMGLDLSTWEDRSYKEREKSLQRLNSQEERVKEGRGVEIGGEGGV
ARAAESSGRAQSEPPPVSSTAAVVVRERTRTLDEPCQRTTRAKRESRRMRELEQAKFSLE
LLKVRATGSGGASSPSEERRWSAELAPTTTPPRRSPQGPGTPDSQSSKGSFELLSMDDEI
LRESAPLADEEELGSPLSSEVQLEQAPEVSLVSKEPPRASVSDDASPPPNSQSQAKLEPA
AASPPPPKIENYLPTFYVPSTDGSLVITHRLGDDSSRPLETDTTSTTIVTKQLKSIKQRR
ELSRRPVVVVISMQKETPLDQEELGGAVVRLPPVEVRDGSAQTGESPSSPRLPVPAPVPP
LDPAPVIPMSGPTPVPAANQLVLEKLERLNEEKEERQRHLQQQNEREMMDQIRKQKEVLE
RQRHHFAQHERELLEKQRGEALVRIQQSRQGGPPQDRSATAATSTRPLRPSSLLIERAPA
LAPPSRTQSVSAAHAYLSPPGPMDTQSVPMPHPEPNKAQPNQARLPPPPSAPKTKTRDGR
PIADGWAPNLTLESREGGGGGARGRVPKKAPANQGTSISMTDMSENIFFAPKDRVAFSKF
DKEKPVNQEKPVAVPKEGPSSSTKPTIGLRTQEVNRAGHRKKARMARTRSDFLTRTPTSS
LGGESEEDEYDGKPPLSSPPPYSPTIPKQDSFECFSDSEMPSTSSEEQKKIHKAMSSGDL
AKVDTIRKNAQSDGRVRGKMRFWGKTKQGEKKSSREKLFCGGDSMDADDGDTGPLLGEAG
QDYMSPPRSPDMTLERGAKEFKENKEPSPKVKRRRSVKISSVALEPAQWGNDALQILTCT
NDYRSMNDFLMKKISDLVAEDGGKKDTMVDVVFKKALKEFRLNIFNSYSTALAMDDGKSI
RYKDLYALFEQILEKTMRLEQRDWSESPVKVWVNTFKIFLDEFMTEYKPMDSTISKQVPK
TERKKRRKKDADIVEEHNGHIFKATQYSIPTYCEYCSSLIWMMDRACVCKLCRYACHRKC
CLKLTTKCSKKYDPELSSRQFGVEVSRLTNEERTVPLVVEKLINYIEMHGLYTEGIYRKS
GSTNKIKELKQGLDTDVNNMNLDDYNIHVIASVFKQWLRDLPNPLMTFELYEEFLRAMCL
QDKKEVIRGVYSIIDQLSRTHLNTLERLFFHLVRIAGQEDTNRMSANAIAIVFAPCILRC
PDTIDPLQSVQDIGKTTACVELIIGEQMNKYCARLKDINSLEFAENKAKCRLTLIRRSMK
PVLIAVRFMTISRSTVPPNAAKKGKGHVRRFSYHTPSPPVSPRLPSVTGAVMQESGGEEV
GSGQEPEVSEHQQLAMQQEERVLTEQIESLQKEKEELTFEMLTLEQRASDDETLESEASI
GTADSSENLNVDSEGATSDFSGPSEREPTLAPVARTKRSEGKSHRRRNLRRQPDSQDSVD
SCSTISSLSSSSHFHPSSSSSVATARHFRYRSKSPSSGSGSAQGLYLPQPPRRDSLDCPP
PAKQEGAFEERSQFTSRGTFNPEKGKQKLKGSKNSPLRHSHDSGGRSRDPPDLPQQRVLY
GSNEFMV
NT seq
8304 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcgtgatggcggccacggcggcgggatcggtggcgtgggcacgctgggcagg
cgaggacgctacgaggactctgagttcaccctgcgcatctatccgggctccctggccgag
ggcaccatttactgccccgtcagcgcccgcaaaagcaccacggccgccgaggccatcgag
cgctgcttggagcgcctgcgtctggaccgtgaccgctgctacgtgctagccgaggtcaag
gaatttggcggggaagaatggatcctgaaccccagcgactgtcccgtccaacggatgatg
ctgtggccccgcggggctctggagcagcgctcgggctcgggcggcggggaggactaccgc
ttcctgctgcggcagaagaatctggatggctccatccactacggcggcagcctgcagatg
tggctgcgtgtgaccgaggagcgccggcgcatgacggagcgtggcctgttgccacaggag
gaggtcaggggtgaccacgccgacttgtgctgcctgccggagctcaacgagcgctcgctg
ctggacaacctacgctcgcgcttccgccaggagaggatttacacctacgtaggcagcatc
ctcatcgtcattaaccccttccagttcctccccatctataacccgaagtacgtcaagatg
tacgacaaccacgctctgggagacctggagccgcacatctacgccgtggcggatgtggct
taccacgccatgctgcagcgacggaggaaccagtgcatcgtcatctctggagagagcggc
tcgggaaagacccagagcaccaacttcctgattcaccacctgactgccctcagccagaag
gggttcgccagcggggtggagcagatcattctgggggcggggccagtgttggaggcattt
gggaatgcaaaaactgcccacaacaacaactcgagtcgctttggcaagttcatccaagtg
aattaccaggagagtggtactgtccgaggagcctatgtggagaagtaccttctggagaaa
tcaagactggtctaccaggaacacaacgaacggaactaccatgtgttttactacctgctg
gcaggagcaagtgaggaggagaggagcacctttcacctcaaaaagcctgaagaatatcat
tacctcaaccagatgacaaagaaagtcctgagactgcactgggagaattactatgagagc
gaagcggactgcttcacagtggaaggggaggacctgaagcatgactttgagagactgcag
ctggccatggagatggtgggattcctgcctgccacgcgcaaacagatattttctctgttg
tcggccattcttcacctggggaacatccgctacaagaagaagacctaccgagatgactcc
attgacatctgcaatccagaagtcctacctactgtctcagaactgttagaggtcaaggag
gagatgctatttgaagccctgacgacgaggaagaccatgacagtgggagagaggctgatc
gtgccctacaaactgcctgaggcgggcacggtgcgagactccatggccaagtccttgtac
agcgcactgtttgactggattgtgttccggatcaaccacgcactgctcaacaaccgggac
ttggaggagagcgccaagatcttttccatcggagtgctggacatctttggctttgaggac
tacgaaaacaacagctttgagcagttctgcatcaacttcgccaacgagaggctccaacac
tacttcaatcagcacatctttaagcttgagcaggaggagtacagggcggagggcatcagc
tggcacaacattgactacatcgacaacacaggctgcatcaacctcatcagtaagaagccc
actgcgctgctccacctgctggatgaggagtccaacttcccccaggcctctaaccagact
ctgctggacaagttcaagcggcagcatgagggcaacggctacattgagttccccgccgtc
atggagcccgccttcatcatccgccactacgccggcaaggtcaaatacggggtcaaggac
ttccgggagaagaatacggaccatatgcgtccggacatcgtggccctactgaagagcagc
aaaaacgccttcatctgtggcctgatgggcatcgaccccccagccaccttccgctgggct
gtcctcagagccttcttcagagccatggtggccttcagggagtctgggaagagacacgta
cacaggaagactgggcatgatgccgctgctccctgcgcagttttgtgcagtgtggatagt
tttagctttctgcatcaccctgtgcatcagagaagtttagagatcctgcagaggtgcaaa
gaggagaagtacagtgtggtcagaaagagtctacgaacaccgctgtcggacctgcagggc
agcaacacgctcaacgagaaatctccacgggatggtgtgggctggaatgggcgtggtggg
cgtcagagccggctgtcatccagcgggtccaacacggaagaggacggaggaatttttgtc
aactccaccagcagcaagctcctggagagagcccacggcatcctcatgagaaacaaaaac
tacaaatcaaagcccagtcttccaaagcacttgcttgacgtcaagtccctaaagtatctc
agcaacctgacactgcacgaccgcatcaccaagtccctcctccacctccacaagaagaag
aaaccacccagcatcagcgctcagttccaggcctctctcaataagctgatggagactctg
ggccaatcagagccctactttgtcaaatgcatccgttctaatgcagagaagctgcccctg
cgcttcaacgagggcctggtgctcaggcagctccgctacacgggtatgctggagaccgtg
cgcatccgccagtcaggctacagcatcaagtacaccttccaggatttcatccgccacttc
cacgtgctgctacccgagggcaccagtgccacccaggaaggcatcggacagtatctgggc
caggtggaccttgctcccgatggataccaagttggcaaaaccatggtgttcctgcgggag
gtggagcgtcagcgactgcaggcgttgcttcacagggaggtcctgaaccgtatcgtcact
ctgcagcgccgcttcagggccctgctggagaggaaacacttcaccaggatgagactggct
gccacagctatccagaaatggtggcgtgcctaccagtccaagcaggaggatgactacgac
ccaagcatccaggagggggcagccttgtgcatccagacagcttggcgggggtacaaggag
cgctggaggttcgggctgtggcgggaggcggccctgctgctgcagagggagtggagggcg
ttgctgaagcggcgagaacgggagggggcggcactcgccatccagacagcctggcgctgc
cacatggccagagaggcctacctgcgactgcgtggcaccatgacgctgctacaggcagtg
ggcaaaggctacctggccagacagagcttcgggcatttgaaggagcagagactgagggag
aaagagcagaggctgagggagagagagagtcaacaacagcagcagcagctgctgcagaat
ggacagacgcgcctctcgccagaagaagacgatctgccagtgaggatcatgggcctggac
ctgagcacatgggaggaccgctcatacaaggagcgggaaaagagcctccagagactgaac
agccaggaggagagggtgaaagagggacgaggtgtagaaataggaggtgagggaggagtg
gcgagggccgcagagagctcaggtagggcccagtcggaaccaccgccagtttcgtcgaca
gccgctgtggtggtgagagagaggaccaggaccctggacgagccctgccagaggaccacc
agggccaagagggagagccggaggatgagggagctggagcaggccaagttcagcctggag
ctgctcaaggtgcgggccacaggcagtggtggggcctcgtccccctctgaagagaggcgc
tggtcggccgagctggcccccaccaccacccctcctcgccgctccccccagggacccgga
acccccgacagccagagctccaagggcagcttcgagctactcagcatggatgacgagata
ctcagggagagtgcacctttggcggacgaggaggagcttggttcccccctctcttctgaa
gtgcagctggagcaggccccggaggtcagcctcgtgtcgaaggagcctcccagggcttct
gtgtccgatgacgcctccccacctccaaacagtcagagtcaggccaagctagaaccagct
gccgcctctccacctccgcccaagatagagaactacctccctaccttttacgtcccgtca
actgatggcagcttggtcatcacccatcgtcttggcgatgactcttcgcggcccctcgag
accgataccactagtaccaccatcgtcaccaagcagctcaagtcaatcaaacaaaggcgg
gaattgtcacggcgacccgtggttgtggtcatcagcatgcagaaggaaacccccctggat
caggaggagctcggtggtgccgtcgttcgtcttccccctgtagaggttcgtgacgggtcg
gcacaaaccggcgaatccccttcatcgccacggctaccagtccctgcacccgttccacca
ctagatcccgccccagtcatccccatgtctggccccacccctgtcccggctgccaaccag
ttggtcctggagaagctggaacgactgaacgaggaaaaggaggagaggcagcggcacctg
cagcagcagaacgagcgggagatgatggaccagatccggaagcagaaggaggttctggag
agacagcggcaccacttcgcccagcacgagagggaactgttggagaagcagaggggtgaa
gccctggtcaggatccagcagagcaggcagggagggcccccccaagacaggagtgcaacc
gcagctacatctaccaggccccttagacccagctcccttctcatcgagagagccccggct
ctggctccaccctcgaggacccagtctgtgtccgctgcccacgcatacctctctcctcct
gggccgatggacacccagagtgtccccatgccccatcctgagcccaacaaggcccagccc
aaccaggcccggctccctccacctccctcagcccccaaaacaaagaccagggatgggaga
cctattgcggatggctgggcgccgaatttgaccctggagtccagagagggcgggggagga
ggagccagagggagggttcccaagaaggccccagctaatcagggcaccagcatcagcatg
actgacatgtcggaaaacatcttctttgcgcccaaagacagagtggcgttctctaagttt
gacaaggagaagcctgtcaatcaagagaagcctgtagcagtcccaaaagagggcccctcc
tcaagcaccaagcccaccataggactgagaacacaggaggtcaacagggcgggccacaga
aagaaagcccgcatggctcggacacgctctgactttctgacccgcacgccgacctcctcg
ctggggggcgagtcggaggaggacgagtacgacggaaagccccccctctcctcccctccc
ccctactccccaaccatccctaaacaggattcctttgagtgtttcagtgactcagagatg
ccttccaccagctctgaggaacagaagaagatacataaggccatgtcatctggagatctg
gccaaagttgacacgatacgcaagaacgcccagtcagatggaagggttcgtggtaagatg
cgtttctggggcaaaacgaagcagggtgagaagaagtcgtccagagagaagctgttctgt
ggaggtgactccatggatgcagatgacggagacacggggccactgctaggagaagcagga
caggattacatgtcaccgcctcgtagtccagacatgaccctggagcggggggccaaggag
ttcaaggagaacaaggagccctcgccaaaagtgaagaggcggcgtagcgtcaagattagc
agtgttgccctagagcctgcccagtgggggaacgatgcactgcagatcctcacctgcacc
aacgactacaggagcatgaacgacttcctcatgaagaagatcagtgacctggtggctgag
gacggcggtaagaaagacacaatggtggacgtggtgtttaaaaaggccttgaaggagttc
cgcctcaatatcttcaactcctactctacagctctagcgatggatgatgggaagagtatc
cgctataaggacctatacgccctgttcgagcagatcctggagaagaccatgcgcctggag
cagagggactggagcgagtcgcccgtcaaggtctgggtcaacaccttcaagatctttctg
gatgagttcatgaccgagtacaagcccatggacagcaccatcagcaagcaggtccccaaa
accgagcgaaagaagaggaggaaaaaggatgctgacattgtggaggaacacaatggccac
atcttcaaggccacccagtacagtatccccacctactgcgagtactgctcctctctcatc
tggatgatggacagggcctgcgtctgcaaattgtgtcgctatgcctgccacagaaagtgc
tgcctgaagttgaccaccaaatgcagcaaaaagtacgacccagagctgtcgtccaggcag
tttggggtggaggtgtcccgtctgaccaacgaggagaggacagtgcccctggttgtggag
aagctcatcaactacattgagatgcacggcctctacaccgagggcatctacaggaagtct
ggctccaccaataagatcaaagagctcaagcagggactggacacagacgtgaacaacatg
aacctggatgactacaacatccacgttatcgctagtgtcttcaagcagtggctccgggac
ttacccaatccgcttatgacctttgaactatacgaggagttcctccgcgccatgtgcctg
caggacaagaaggaggtgattcgaggggtctactctattatcgaccagctcagtagaact
cacctcaacactctggaacggctcttcttccacctagttaggatcgcagggcaggaggac
accaaccgtatgtcggccaacgccatagccatcgtcttcgccccctgcatcctccgctgc
cccgacaccatcgaccccctgcagagtgtccaggacatcggcaagaccacagcgtgtgtg
gagctcatcatcggagagcagatgaataagtactgcgcccggctaaaggacatcaacagt
ttggaatttgccgagaacaaagccaagtgcagattgaccctcattcggagatcaatgaaa
cctgtactaattgctgttagatttatgaccatatcccgcagtactgtcccgccaaacgca
gccaaaaagggcaagggccacgtacggcggttcagctaccacacgccctcgcccccggtt
agcccacgcctgccgtccgtgacgggtgcagtgatgcaggagagcggcggtgaggaggtg
gggtcggggcaggagcctgaggtatcggagcaccagcagttggccatgcagcaggaggag
agggtgctgacggagcagatcgagagcctgcagaaagagaaggaggagctaacctttgag
atgctgactttggagcagcgagcatcagacgatgagaccctggagtcggaggcgtccatc
ggcacggccgacagctctgagaacctcaacgtggactctgaaggagccacttccgacttc
tccggtccctcagagagagaacccacgctggcccccgtcgcccgaaccaagaggtcggag
gggaagagccaccgacgccgcaacctacgcaggcaaccagactcccaggactcagtggac
tcctgttccaccatctcctccctctcttcctcctcccacttccacccgtcctcttcctcc
tctgtggccacagctcgccactttcgctaccgctcaaagtcgccctcttctggctctggc
tctgcccagggcttgtacctgccccagcctccccgccgcgacagcttggactgtcccccc
ccagccaaacaggagggggcattcgaagagaggtcacagttcaccagccgaggcaccttc
aacccggaaaagggcaaacagaaactgaaaggatccaagaactcacccttgaggcactcc
catgacagtgggggccgcagcagggatccgcctgacttaccccagcagcgggttttgtac
ggcagcaatgagttcatggtatga
DBGET
integrated database retrieval system
