Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385248
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Entry
139385248 CDS
T10872
Name
(RefSeq) FH1/FH2 domain-containing protein 1-like isoform X1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139385248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139385248
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
139385248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Motif
Other DBs
NCBI-GeneID:
139385248
NCBI-ProteinID:
XP_070986499
LinkDB
All DBs
Position
26:50072679..50244991
Genome browser
AA seq
1477 aa
AA seq
DB search
MAIITCRVQYLEDSDPFVCTNFPEPRRPPPYDLDENIALIEQIAGVHKLLEAPLKLEECA
LQMAPNGNYLDLDLSLGEQKDDVEQLYDDVGRGKKPILILRTQLSVRVHSILEKLYNSHG
PELRRSLFSLKQLFEDDKDLVPEFVNSEGLTCFIKVGAEADHNYQNYILRALSQIMLFVD
GMNGVIDHNDTVQWLYTLSGSLSRLVVKTALKLLIVFVEYTELNSPLLIQAVNTVDGKRG
VKPWSYLTEILEEKNGSDTELFILTMNLINKTLAALPDQDSFYDVTDCLEQQGMEHIMHK
HMSSKVTEPDLKQQFTIYERALRHEDGEMDAAPHVRKERRKVTASEQEGRRIRRSSAQNL
PDILSSSPTTSNTISPSSTLSPSTPSPFSPSSSTLSPSTSSPFSPSSSSPSNSPTAGLSR
TSSPLPSSSRSASPLTPTSSPSDSGSQRSSPLPPPEVTNGTAASLSPTEQEPKTTSNLGR
SFLSHHMSALGISRRSRHFNKAGSISEEPAPSASRAASSPSPTDLAGPEKQQQPQTVPVQ
HGNKTERNTFSSEQASHSAVCPEDCNVNMDKPVLRKFQGTFLRNLVATQWEKTSRSQHEK
LQDDPIVTSPREEEETSPADSSPSTPTEAPFQASGAETGPQPELHTGGQVSGETGPIQRT
LEQPDPADTQATHNDPGVSVQQKNLCNKKKFMLNMLYANNSSGSSGERPSGTNPDPNLDP
EESLSGEPEDHRGLGRAGSSVKERLSSLKAQQAQPLPSEDSSSRRAELQGLGGSAQAARA
RLAEEQQHRRVRPQYSIDAETHSRNLEKTQMTPLARDRQTDAWDQLQPSSKALKIKDLDF
SDLMEEEDIDVLDVDVFDVGVGRPGGGGGIPPPPPPIPGLASAPPPPPPPPGAPFMSIPP
PPPPPPGGGLCSPPPPPPPGAPPSSSSSSQTPDPAFAKKRKTVKLFWKELKQSDSPRKCK
FGRGTVWASLDKVTVDTAKLEHLFESKAKELPVALKKGSEVKKAEILVLDSKRSNSINIG
MTVLPAVHVIKTAILNFDEFAINKEGIEKILTMTPSEEEKQKIQEAQLANPDVPLGSAEQ
FLLTLSSISGLSARLQLWAFKLNYETLEKEIAEPLFDLKLGMEQLAKNKTFKRILATLLA
IGNFLNSTSAKGFELNYLEKVTEVKDTVHRQSLLHHTCNFLVDNYTDTSDVYSEIPSITR
SARVEFEQLSDSLVQLERKCKTSWDNLKVMSKHETKALLKNRLTEFLKDCTERIIILKVV
HRRIINRFHSFLLYLGQPSYSVRDTKVTHFCKIISEFSLEYRTTRERVLTQKHKRATHRE
RTKTRGKMITETEKFSGVVSPQSQDSPSLGSRPTEPDPDPAQEEHDNMKNVLNTSSGIEH
QGNLRRNRGYRSLGPVSSSQMSVAKEDSASSQDDATDEIMDRLVKSVTRSPSERPSSPKT
RKRSRLNRKSLRRTLKSGLSVDVVQALGLSNKTGDQL
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggccattataacctgccgagtgcagtatttggaggactcggaccctttcgtctgtacc
aacttcccggagccacggagaccgccgccctatgatctggacgaaaacatcgccttgatt
gagcagatagccggggttcacaaactcctggaggcaccgctgaagttggaggagtgtgct
ctgcagatggcccccaatgggaactacctggacctggacctgtctctgggggaacagaaa
gatgatgtggaacagctctatgacgacgtgggtagagggaagaagcccatcctgatcctg
agaactcagctatctgtcagagtccactccattctagagaagctgtacaactctcatgga
cctgagctccggaggtccctgttctccctcaagcagctcttcgaggacgataaagacctg
gtgccagagtttgtgaattcagaaggcttgacgtgtttcatcaaggttggagcggaggca
gaccacaactatcagaactacattctccgagccctcagtcagatcatgctgtttgtagat
gggatgaacggtgtgatcgaccacaatgacactgttcagtggctctacactctcagtggc
agtctgtctcgtctggtggtgaagaccgctctgaagctcctgatagtgtttgtagagtac
acagagttgaacagtcctctacttatccaggctgtcaacactgtggatggcaagagaggt
gtgaagccgtggtcatacctgacagagatcctggaggagaagaacggatcagacaccgag
ctgttcatcttaaccatgaacctcatcaacaagacccttgcagccctcccggaccaggac
tcgttctacgacgtgaccgattgtctggaacagcaggggatggaacacattatgcacaaa
cacatgagtagcaaggtcactgagccagacctgaaacagcagttcaccatatacgagagg
gctctgaggcacgaggacggagagatggatgctgctcctcacgttaggaaggagaggagg
aaggtgacagccagcgaacaggagggcaggaggatcaggagatcctcagctcagaacctc
cccgacatcctctcctcctcacctaccacatccaacactatctctccctcctccactctc
tccccttccaccccctctcctttctctccctcctcctccactctctccccttccacctcc
tcccctttctctccctcctcctcctctccctctaacagtcctacagccgggctgagtagg
acctcctcccctctcccctcctcctctcgtagcgcctcacccctcaccccaacctccagc
ccatcagactctggttctcagaggtcctctcctctaccgccccccgaggtgaccaacggt
actgcagcctccctgtctcccaccgaacaggagcccaagacaacgtctaatctggggcga
tcattcctcagtcaccacatgtctgccttggggatcagtaggaggtcacggcactttaac
aaggctggttccatctctgaggaacctgctccttctgcttctcgagccgcaagcagcccg
tctcctactgacttggctggccctgagaagcaacagcagccccagacggtcccggtgcaa
cacgggaacaagacagagaggaacaccttcagctctgagcaggccagccacagtgccgtt
tgcccagaggactgtaacgttaatatggacaagcccgtcctcaggaagtttcaaggcacc
ttcctccgcaacctggtcgccacccagtgggagaagacgagtaggagccaacacgagaag
ctccaggatgaccccatagtcacgtcccccagggaagaggaggagacctcacctgcagac
agcagccccagtacacccaccgaagccccgttccaggccagcggtgcagaaacggggccc
cagccagagctccacacaggggggcaggtctcaggagagactggccccatccagagaacc
ctggagcagcctgacccagcagacacccaggcgacccataatgatccaggtgtcagtgtc
caacagaaaaacctctgcaacaagaagaagttcatgctgaacatgctctacgccaataac
tcctctgggtcttcaggggagcggccgtcaggcaccaaccctgaccccaacctcgacccc
gaggagagcctctccggagagccagaggaccacagagggctgggcagggctggtagcagt
gtgaaggaacgtctatctagcctcaaggcccagcaggcccagcctctacccagcgaggac
agcagttccaggagggcagagctgcagggtctgggtggcagtgcccaggcggcgcgggcc
aggctggcagaggagcagcagcacaggcgtgtccggccgcagtacagcatcgacgcagag
acccactcccgaaacctggagaaaacccagatgaccccactggccagggacagacagacg
gacgcctgggaccagctccaacccagctccaaagccctgaagattaaagacctggacttc
tccgacctcatggaggaggaggacatagatgtcctggacgtggacgtcttcgacgtgggt
gttggtcggcccggtggtggtggtggcatcccacctcctcctccacctattcctggacta
gcgtccgctcctcctcctcctcctcctccccccggggctccgtttatgagtatccctcct
ccacctcctcccccaccgggtggaggtctctgctcccctcctccaccacctcctcctgga
gctcccccttcctcctcctcctcctcccagactccagacccggcctttgccaagaagagg
aagacggtcaagttgttttggaaggaactcaaacagtcagacagtcccaggaagtgtaaa
ttcggacgcgggacggtgtgggcgtccctggataaggtcaccgtggatacggccaagctg
gaacacctgtttgagtccaaggccaaggagctacccgtggctctaaagaaaggatcagaa
gtgaagaaagcagagattctggtgttggactctaagaggagtaacagcatcaacatcggc
atgactgtactaccagctgtccacgtcatcaagaccgccatcctcaactttgacgagttc
gccatcaacaaggagggcatcgagaaaatcctgacgatgactccttcggaggaggagaaa
cagaagatccaggaggctcagctggccaacccggacgtccccctgggctcagcagaacag
ttcctcctcaccctgtcctccatcagtggcctcagcgctcggctacagctctgggccttc
aaactcaactatgaaaccctggagaaggagatagcggagcctctcttcgacctgaaacta
ggcatggagcagctcgccaaaaacaaaacctttaagcgtatcctagcaacgcttttggcc
attggaaacttcctcaacagtaccagtgctaaaggttttgagctgaactacttggagaag
gtaactgaggtgaaggatacggtccacagacagtctctgcttcatcacacctgcaacttc
ctggtggacaactacaccgacacctcagacgtctactccgagatcccctccatcacacgc
tctgctagagtggagtttgagcagctgtcagatagcctggttcagctggagaggaagtgt
aagacatcgtgggacaatctaaaggtgatgtctaaacacgagaccaaggccctcctgaag
aacaggttgacagagttccttaaagactgtacagagaggatcattatcctgaaggtggtt
cacagacgcatcatcaacaggttccattccttcctgctgtacctaggtcagccatcctac
tctgttcgggacactaaggtgacccacttctgtaagattatcagtgagttttctctggag
taccggaccaccagggagagggtcctgacccagaaacacaagcgggctacccacagagaa
cgcaccaagaccaggggaaagatgatcactgagacagagaagttctcgggggtggtgtct
ccccagtcccaggacagcccctcccttggctccaggcctacagagccagatccagatcca
gcccaggaggagcatgacaacatgaagaacgtgctcaacacctccagtggtatcgaacac
caggggaacctgcgccgcaaccggggctaccgcagtctaggcccagttagttcatcccag
atgtctgtagccaaagaggacagtgctagctcccaggatgatgctacggatgagatcatg
gatcggctagtcaagtctgttaccaggagcccctcagagaggccgtccagccccaagaca
cgcaaacgctcccgcctcaacaggaagtcgttgaggaggactctgaagagcggactaagt
gttgacgtggttcaggctctgggactcagcaacaagactggagaccagctctga
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integrated database retrieval system
