Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385291
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Entry
139385291 CDS
T10872
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139385291
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139385291
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
139385291
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Gene cluster
GFIT
Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
139385291
NCBI-ProteinID:
XP_070986554
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Position
26:complement(4537050..4588096)
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AA seq
837 aa
AA seq
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MALQFQYLWPRKSDSYEVKFSWFSGVNCSFLTGFMSGVSNPVPGELLSSSSVNDILQDFS
DQREMTKQPANAPTGFKPLHQPEGAVGVSANKPYNALNQTSAAYPAPQPAPSNESKTFCP
TENKPGEVSKVYGTFKNAAPAVPGSVAANSALRKDSTSSVGGSAARVVPVQCGDPLRATG
DQNNASGNWTTMSQTTIILGADGNTSVQPGAVTGEAEEDESGDENKARGNWTNKLDFILS
MVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFASQGPVSVW
KAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWNTLDCKDK
DMLLLDTCILHDKNITSVKNSSFCLSAQAIGNLTKLVNMTYPDNKTYVSPSEEYFKYNVL
HISKGIEYPGDIRWPLAGCLLLAWLIVYLSLAKGIKSSGKVVYFTATFPYVVLVILLFRG
VTLPGAGDGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYR
DTIIVCIVNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRLPLS
PFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPQYLRKNKPLFTLICCACFFFLGFPM
VTENGMYMLQLVDTYAASYSLVIIAICELIGISYFYGLQRFCEDIEMMIGFQPNRFWRIC
WAFVTPTILTGILGLSLYQWKVMTYEDYTYPPWSMVMGWLMVVCSVIWIPIMFVIKMYLA
PGSFMERLKLVCSPQPDWGPFLAKHRGERYKNMMDPHGSNSLGLKLPPKDFQLGTYQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcattacagtttcagtatctctggcccagaaagtcggattcttacgaggtaaagttc
tcctggttcagtggggtcaactgcagttttctcacagggtttatgtcaggggtctccaac
cctgttcctggagagctactctcttcctcatctgtaaatgacattttgcaggatttctcc
gaccagagagagatgaccaaacagccggccaatgctcctaccggttttaaaccgttgcac
cagccggagggggcggtgggagtttcagccaacaaaccgtacaatgcccttaaccaaacg
tccgccgcttaccccgcccctcagccagcaccatccaacgagagcaaaactttctgtccc
acggaaaataaaccgggagaagtcagtaaagtctatggaacatttaaaaatgccgctccg
gcggtgcctggatccgtggctgcgaactcggccttacgtaaggattccaccagctcagtt
ggtggttctgctgcccgggttgtccctgtccagtgcggggacccgcttagagctaccggg
gatcaaaacaatgcgtcgggcaactggaccaccatgagtcagaccaccatcattctgggc
gcagatggcaacacgtctgttcagcccggcgccgtgacgggggaggccgaggaggacgag
agtggagatgagaataaggccaggggaaactggactaataaattggatttcatcctgtcc
atggttggttatgccgtgggactgggaaacgtgtggaggtttccataccttgccttccaa
aatggtggaggtgcttttttgatcccctacctgataatgttgtgcctcgccgggatccct
atctttttattggaggtttccctgggtcagtttgccagccagggccccgtgtccgtgtgg
aaagccatcccggctctgcaaggttgcgggattgccatgttgataatatctgtcttgata
gccatatactataacattattatgtgctggacactgtactacctgttcgcttcgttgaag
ggctcactgccatgggctaactgtaagaacgagtggaacacgttggactgtaaggacaaa
gacatgcttctcttagacacgtgcatcctccatgataaaaacatcacctctgtaaagaac
agctcgttctgcctgtcggctcaagccattggaaacctgaccaaactggttaacatgacc
tatccggataacaaaacttacgtcagccccagcgaggagtacttcaagtataatgtcttg
cacatctccaaagggatagagtaccctggagacatccgctggcccctcgcaggctgcttg
ttgctggcctggttgatagtctacctctccctggccaaaggaatcaagtcatcagggaaa
gtggtgtatttcacagctacgttcccctatgtggttctggtcattctgttgttcagagga
gtgaccctcccaggggctggtgacggcatcctctacttcatcacacccaagtgggagaaa
ctcaatgatgctaaggtgtggaaggatgctgccacccagatcttcttctctctgtcagca
gcctggggaggcctcatcacactgtcttcttacaacaagttccacaacaactgctacagg
gacaccatcatcgtgtgcatagttaacagtgccaccagtatattcgctgggttcgtcatc
ttctccgtcattggattcatggcccatgaactgaaggtgcccattgagaaggtggcagat
gaaggtccaggcatagcatttgtggtgtacccggaggctctgaccagacttccactctct
cctttctgggccatcatattcttcctcatgctgctgaccctcggcttggataccatgttt
gccaccattgagaccatagtgacgtcggtgtcagatgagttcccacagtatctgagaaag
aacaagcctctgttcacgctcatctgctgtgcctgtttcttcttcctgggattccctatg
gtcacagagaacgggatgtacatgctccagttggtggacacgtatgctgcctcttactct
ctggtcatcattgccatctgtgagctaatcggaatctcctacttctatggcctgcagagg
ttctgcgaggacattgaaatgatgattggcttccaaccaaaccgcttctggagaatctgc
tgggcctttgtgactccaaccattctgactggtatcctggggctgagtctgtaccagtgg
aaggtgatgacctatgaggactacacctaccctccctggtccatggtgatggggtggctg
atggtggtgtgttctgtcatctggatcccaatcatgtttgtcatcaaaatgtacttggcc
ccaggcagcttcatggagcgtctgaagctggtgtgctcccctcagcccgactggggtccc
ttcctggcaaagcacagaggggagcgctacaagaacatgatggatccccatggatccaac
tccctgggcctcaaactgcccccgaaagatttccagctgggcacctaccagtag
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