Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385464
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Entry
139385464 CDS
T10872
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139385464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139385464
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139385464
Endosome - Golgi transport
Arf GTPase associated proteins
139385464
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139385464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_3
PH_6
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
139385464
NCBI-ProteinID:
XP_070986620
LinkDB
All DBs
Position
27:35624425..35739402
Genome browser
AA seq
1639 aa
AA seq
DB search
MSEAEGCVSLWEWLCVLHLDQYFPVFQDAGFGTLLECQGLTQDQLETIGITLPGHRKRIL
ASLQKTLHTNTHTHPESEPDALHTHLAAEGDQREEERAVFTDRPSPVGSERPVPAQRPVS
RGERPVPAQRPVSRGERPVPKERSVSREGERDGERPVPAQRPVPKERTKYRSVPVETLDC
VQTYPRPNTSPCPTTPHSSAQHSPLPPIPPRSTPNCPPLRFIPTSPKNSPTAPKPRSEHN
NLNTPITVPPPILTTNPLTLPSPRPCPAPLAIYPPARYSQQVWEGGRKPSPGSPSSSSSS
SSSFERYDQSSSDQGVPPLPPKVYVVGAGPKEPHSPAPIPHQPPVLPSRTTPTQSDAPIN
EPHTDRTPPPPPRTKVPNTPVDTQPALPMRRIPLPRPEIRSGDSSDDYEDPDQVFPKPQA
VNLAEDPDQIYSKLQSVNMADRDVFLPVPVWGKGRYNSLCSDDELLDDDNEPISSHRSSW
QDYGLSTLQGSVYLPVRGRVLAPPPRDGPSPETCPVLKIGWLDKNPTQGSLYYQRRWVKL
DVDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEVVTANRTFLFKAESDSERNEWVA
VLQNFTRGRQEGSREMTSLVPPSFLTPGSPLTPEQQGYLELRGLRSKLYTVVSGDKVFLY
KNMEDYRLGIGITSIDMNVGNVKVTDRRSFDLTTPYRIFSFLADSEQHKEQWVEAMRDAI
GEALSNSEVANQIWAEPSNGCCADCGAAKPEWAAINLCVVVCKRCAGEHRGLGPSISKVR
SLKMDRKVWTEELIQVFLLLGNERLNRFWAANIPPSEALSPTSCSEDRRRFISSKYRQGK
YRKYHPLYGNQRELNNALCINVQCSDVLETLCLVFCGADVNCSTGQTDCPSPLSLALAHN
QKLQAQFLSHNLNTELPRSEVTGDMEPRHYSPQHPVTHNGFLFKTASMVRPITERKAREE
FSRRWCMLNDGNFSYYESDKTSTPNGALKSTEIVCLSVNTPERHGYDHTFELYSDSERLY
LFGTDDQDSHKEWVKSITKMFIPSNAEALLRLSFERIGRLKYKDGLNLQSPRVGWFALVG
SSLHAYLEDSEEEEEIHLRKLQELSIQQENEVLVLVERGRTLYIEGERKLDFQGWCVGIQ
KAAGSAGDSLSQQQLTEADIPVIVDRCIDYITQCGLTSEGIYRKSGVNSRVAALCEAFRR
DARNVRLKEEEHQVDDVSNTLKRFFRESGEGLFTIQAASAWLSTPVIPEESKKISQYQLL
LSRLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVFGPTLFQTDGKDYTAGRVVEE
LIEHYTDVFEVDEQQLKRQLDEITVIIKVREKLNLNSSVPASGSAGDFICTVYLEEKKET
AEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCWEVSQKEETERPLHHLERVLPILH
SLGTDSHLLVKKNLAMEAILVYLASKVDVSKHGMVKFREERSILGLGLNTGSFHDRYFIL
NTVSLRMYKEVRSNRSEREWQVKNLRVYLGIKKKLRPPTCWGLTVIYKSEKQEKPEKQQW
YLCCDTQTEMREWFSTFLTVQYDGNVWPVDAVQTRVTRALPVDTRHGNVALIPLRGSENE
MRNSVAAFTADPLGLFRDV
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggaggggtgtgtgtcgttgtgggagtggctgtgtgtgctgcatctggac
cagtatttcccagtgttccaggacgcggggtttggaacgctgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcacattgcctggacaccgcaaacgcatccta
gccagcctgcaaaaaacactccacacaaacactcacacacacccagagagcgagcccgac
gctctacacacacacctggctgcagagggagaccagagagaggaagagagagcagtgttc
acagacagacccagccctgtggggagtgagagaccagtccctgcacagagaccagtgtcc
agaggagagagaccagtccctgcacagagaccagtgtccagaggagagagaccagtccct
aaggagagatcagtgtccagggaaggagagagggatggagagagaccagtccctgcacag
agaccagtccctaaggagagaactaagtaccgctctgtccctgtggagacattggactgt
gtccagacttaccctcgtcccaacactagcccctgccctaccaccccccattctagtgcc
cagcactcccctttaccccccatcccacctcgcagcactccaaactgccccccactacgc
ttcatccccacctcccctaaaaactcccccacggcacccaaacccagatctgaacataac
aacttaaacaccccaatcactgtacctcctcctatccttaccaccaatcccctcacctta
ccctcccccaggccctgtcctgcacctctggctatctacccaccagccagatactcccag
caggtgtgggagggaggaagaaagccctctcctggttccccctcatcctcatcctcctct
tcctcctcatttgaacgatatgaccagtcatcatctgatcaaggcgtgcctcccctcccc
cctaaagtctatgtggtgggggcgggccctaaagagcctcatagtcctgctccaatccca
catcaacctcctgtcttgccctccagaaccacacctacacagagtgatgctcccatcaat
gagccgcacacggaccgaactccaccacccccgcctcggaccaaggtacccaatacacca
gtcgacacgcagcctgctctgcccatgagaaggatccccctgccacggcctgaaatcagg
tcaggtgacagttcagatgactatgaagatccagaccaagtcttccccaagccccaggct
gtgaacctggcagaagatccagaccaaatctactccaagctccagtctgtgaacatggca
gacagagatgtgttcctgccagtgccggtgtgggggaagggacggtacaactctctctgc
agcgacgatgaactattggatgatgacaatgagccaatcagcagccatcggagctcatgg
caggactatggtctgagtacgctccagggtagtgtctacctgccggtcagaggcagggtc
cttgccccgccccctagagatggcccctcccctgaaacctgccctgttctaaagattggc
tggctggataagaacccaacccaggggtctctgtactaccagaggagatgggtgaagctg
gatgttgactacctgagatactttgacaacgacaaggaggtatactctaagaggatcata
ccaacggctgccattacgggggtgaccaacgtgggggagcagaagtttgaggtggtcaca
gccaaccgaacctttctcttcaaagccgagagcgactctgagaggaatgagtgggtggca
gtgctgcagaacttcactagggggcgccaggaaggcagcagggagatgacctcattggtc
ccgccctcctttctgacccctggttcacccctgacccctgaacagcagggctacctggag
ctgaggggcctgcgctccaaactctacacagtcgtctccggagacaaggtcttcctctac
aagaacatggaggactaccgccttggcatcggtatcacgtctatcgacatgaatgtagga
aacgtgaaagtcactgaccgccgcagttttgatttgaccacaccctaccgcatcttcagt
tttctagcggattcggaacaacataaggagcagtgggtagaagcaatgcgtgacgcaatt
ggagaagctctgtccaatagcgaggtggctaatcaaatctgggcggagcctagcaacggt
tgctgtgccgactgtggcgccgccaaacctgagtgggctgccatcaacctgtgtgtggtg
gtctgcaaacgctgtgcaggagagcatcggggtttgggccccagcatctctaaggtgcgc
agtctgaagatggacaggaaggtgtggacagaggagcttatacaggtgttcctgttgcta
ggaaacgagcgtctgaacaggttctgggcggcgaacatccctcccagcgaggcgctgagt
ccgaccagctgcagcgaagaccgccgccgattcatcagctccaaatacagacaaggcaaa
taccgcaaatatcaccccctctacggcaaccagagagagctcaacaacgccctgtgtata
aacgtgcagtgcagtgatgtgctggaaacgttgtgtctggtgttctgtggagctgatgtg
aactgttctactggccagactgactgtccctcccccctctctctggcactcgcacacaac
cagaaactacaggcccagttcctctctcacaacctcaacacagagctgcctcgttcggag
gtgactggggacatggagcctcgacactattcaccacagcaccccgtcactcacaatggc
ttccttttcaagaccgcctccatggtccggcctattacggagcgcaaggccagggaggag
ttcagtcgtcgctggtgtatgttaaatgatgggaactttagttactacgagagtgacaag
acctccacgcccaacggtgccctgaagtctacagagatagtctgtctgtctgtcaacaca
ccagagagacatggctatgaccatacgtttgagctgtactctgactcagagcgtctctat
ctgtttggaactgacgaccaagacagccacaaggagtgggtcaaatccatcaccaagatg
tttattccgtccaatgcagaggctctattgagactgagctttgagcggattggccggctg
aagtacaaggacgggttgaacctacagagccctcgggttggctggtttgcgctggttggc
tcctccctccatgcctacctggaggacagtgaggaagaggaggagatacacctacgcaaa
ctgcaggagctctcgatccagcaggagaatgaggtgctggttctggtggagagaggcagg
acactgtacatcgagggggagaggaagcttgacttccagggttggtgtgtgggcatccag
aaagcagcaggcagtgcaggagactctcttagtcagcagcaactaactgaggccgacatc
cctgttatagtggaccgctgcattgactatatcacacagtgcggtctgacgtctgagggt
atctaccgtaagagcggtgtgaacagtcgcgtggcggcgctgtgcgaggcgtttcggcgt
gatgcccgtaatgtgcgtctgaaggaggaggagcaccaggtggacgacgtgtctaacaca
ctgaaacgcttcttcagagagtctggagagggcctgttcaccatacaggctgctagcgca
tggctcagcacacctgtgatcccagaggagagcaagaagatctctcagtaccagctgctg
ctgagccgcctgcccagagtcaacaaggccacgctacgagccctggtcaaccacctctac
tgtgtgcagcggtttgcagagctgaaccagatgaatctccataacctggctatagtattt
ggcccaacactgttccagaccgacgggaaggactacacagctggccgcgtcgtagaggaa
ctcatagagcactacacggacgtctttgaggtggatgagcagcagctgaaaaggcagctg
gatgagatcacggtcatcattaaagttagagagaagttgaacctcaactccagcgttcct
gcgtcggggtcagcaggtgacttcatctgtacagtgtacctagaggagaagaaggagacg
gcagagcagcatgtcaagatccctggttctatgacggcagcagagctgacctgtgagatt
ctggaccggcggaagatccaggtcagagagaaagactactggagctgctgggaggtcagc
cagaaggaggagaccgagcgtccgttgcatcatctggagcgtgtgttacccatcctacac
tctctgggtaccgactcccacctgctggtcaaaaagaacctggccatggaggccatactg
gtctacctggccagtaaagtggatgtgtccaagcacgggatggtgaagttccgggaggag
aggagcattctgggattgggactgaacaccggcagcttccacgaccgctacttcatccta
aacactgtctccctcaggatgtacaaggaagtgcggagtaatcgttcagagagggaatgg
caggtgaagaatctgagggtctatctaggcatcaagaagaaactacgaccacccacctgt
tggggtctgactgtgatctataaaagtgaaaaacaggagaagccagagaagcagcaatgg
tatctgtgttgtgacactcagacagagatgagggagtggttctccaccttcctcactgtc
cagtatgatggtaacgtgtggccagtggatgcagtccaaacacgtgtgacccgtgcattg
ccggtggatacgcgtcatggtaacgtggcattgattccgttgcgcggcagcgagaatgag
atgcggaacagcgttgcagctttcactgccgacccgcttggcctctttagagatgtctga
DBGET
integrated database retrieval system
