Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385502
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Entry
139385502 CDS
T10872
Name
(RefSeq) contactin-5-like
KO
K06761
contactin 3/4/5/6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139385502
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
139385502
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Contactins
139385502
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
Others
139385502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_C17orf99
Ig_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
C2-set
fn3_4
YejG
IMPa_N_2
Motif
Other DBs
NCBI-GeneID:
139385502
NCBI-ProteinID:
XP_070986711
LinkDB
All DBs
Position
27:complement(50110764..50646747)
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AA seq
1098 aa
AA seq
DB search
MGSPWKPLLLLSVISGLSDFAVAVRPVSYAAVLRRKPDISSSLLSSWPRPQHRHDHGRGL
VTPDWPASFSNHHLSTLSLLSSQEEYRSQEREEFGPVFVQEPHDAVFALDSEEKKVMMSC
EARGNPVPVYSWFINGTVVEAENRYSLIDGNLIITNASETADYGRYQCKAENSYGTVLSR
DALLQFAYLGSFSGRTRGGVSVREGQGVVLMCTPPPHSPEIMYSWVFNEFPSFVAEDSRR
FISQVTGNLYVSKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLRTDGLMGEYEPKIEVH
FPLSVPAARGVTVRLECFALGNPVPTITWRKMNGNIPKKARLRKSQAVLEIPNVQLEDSG
TYECKAENPRGGTAFKGHIQVYTFPQWISTINDSQLDSGDQLHWECKATGKPRPTYRWLR
NGEPLTPQSRVEVVNGELIIQKVQQADSGMYQCVAENKYGAIYCSAELKILASPPVFSPN
PVRLIATLGKDMLLGCRPRASPKPRVTWRRGDRRIQPSRRIMLLRNNTLRIINSTRSDEG
NYVCRAENQFGSAEMTAMLWVKEAMRVDLSPSRVEVTVGESVVLSCKVSHDPSLDVAFQW
LLNQQPLNFQQEGGHFEYTQTQSSTVDLMIRSILLKHAGKYGCRAQTSADTVFAEAEVLV
RGPPGPPGVVIVEEIKDTTATLSWSGGVDNHSPISSYNLQARSPFSLGWQTLRTDPEPVT
GDMESAMAVELNPWVDYEFRVVASNAIGTGDPSAPSRGVRTKEAVPSVVPANVSGGNGRR
HELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWKEKMVTSADSTMYKYRDETFPPLTPF
EVKVGVYNNKGDGPFSGVVTVYSAEGEPREAPSEVKASSISSSEIKVTWRPPNPGPGRPR
GYEVSYTKDSEQEESGNRKKTVGNETSMVLTGLEGNSVYLITVRGFNSIGQGPASTASTA
KTKKDPPVQPPANLVWIQEGTNVSLNWDPVKSKDNESDVIGYKVLLSQEGRVHNQVMRTI
TPSAVLSLPEGGTYIIEVRALSEGGEGAISSQVRVLTSSGVRVKSGQRSVHSLLPLGLTW
PWTLALLLSVPLVPSASW
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgccatggaaaccacttctcctgctgtccgtcatcagtggcctttcagacttt
gctgttgcagtacggccagtgtcgtacgcagcagtgttgagaaggaaaccagacatctcc
tcatcgctgctcagttcgtggccccggcctcaacaccgacatgaccacggcagagggctg
gtgactcctgactggccggcatcgttctccaaccatcacctgtctaccctcagtctgctc
agctctcaggaggaatacaggagccaagagcgtgaagagtttgggccggtgttcgtccag
gaaccacatgatgccgtctttgcgttggactctgaagagaagaaagttatgatgagctgt
gaagccagaggcaaccctgtacctgtatacagttggttcatcaatggaacagtagtggag
gcagagaaccgttacagcttgatcgacggcaacttgataataaccaacgccagcgagacg
gcagactatgggagataccagtgtaaggcggagaacagctatgggacggtcctgagtcgg
gatgcactgctacagtttgcctatctgggatccttcagtgggaggacgagaggaggcgtg
tctgtaagggaaggacaaggagtggtgctcatgtgtaccccaccccctcattctccagag
atcatgtatagctgggtgttcaacgagttcccatcgtttgtggccgaggatagccggcgg
ttcatctcccaggtaacgggcaacctgtacgtgtccaaagtgcagcctagcgacgtgggc
agctacatctgtctggtgaagaacacagtgaccaacgccagggtcctcagcccgcccacg
ccactcacactcagaacagatggtctaatgggagaatatgagcctaaaatcgaggtgcat
ttccccctgtctgtcccggctgccagaggagtcaccgtgaggctggagtgtttcgccctg
gggaatccagtcccgacaatcacatggaggaagatgaacggtaacatccctaagaaggct
cgtctgaggaagtcccaggctgttctggagatccctaatgtacagctggaagactcaggg
acctacgaatgtaaagcagagaaccccagaggaggaacagcctttaagggacacatccag
gtctacaccttcccccagtggatcagcacgataaacgacagccagttggacagtggagat
cagctgcactgggagtgcaaggccacagggaagcctagacccacctaccgctggctccgc
aatggagagccgctcacaccacagagcagggtggaggtggtgaatggagaactcattatc
cagaaggtccaacaggctgactctgggatgtaccaatgtgtcgctgagaacaaatacgga
gccatctactgcagcgcagaactcaagatcttagcgtcacccccagtcttcagccctaac
cctgtccgtctgatcgccacgctggggaaagacatgttgttgggatgtagacccagagca
tctcccaagcctagagtaacatggaggagaggagacagacgcattcagcccagcagaagg
ataatgctgttacgaaacaacacgctgaggatcatcaactccacccgctctgacgagggg
aactatgtctgtcgagccgagaatcagtttggctcggctgagatgacggccatgctctgg
gtaaaagaggccatgcgtgtggacctgagccccagcagggtggaggtgacggtgggggag
agcgtggtgctcagctgtaaggtgtcacatgacccgtctctggacgtggccttccagtgg
ctcctcaaccagcagcccctcaacttccaacaggagggcggacattttgaatatacccaa
acacagtcctccacggtggatctgatgatcagaagcattctgctgaagcatgctgggaaa
tacggctgccgggctcagaccagcgccgacacggtgtttgctgaggctgaagtcctcgtt
agaggccccccaggaccccctggtgtggtgatagtagaggagatcaaggacactacagcc
accctgtcttggagtggaggggtggacaaccacagccccatcagcagctacaatctccag
gcccggagccccttctccctggggtggcagaccctcaggacagacccagagccagtgaca
ggggacatggagtcagccatggctgtggagctcaacccctgggtggactatgagttcagg
gtggtggccagtaacgctatcgggacaggagaccccagtgccccatccagaggggtccgg
actaaagaagcagtcccctcggtggtcccagctaacgtcagtggagggaacggccgcagg
catgaactggtcatctcctgggagcctgtgtctgaggagttccagaatggggagggcttt
ggctacatcgtggcgttcagagccaatggaacgcgaggatggaaggagaagatggtgaca
tcagcagattccactatgtacaagtacagagatgagaccttccctcccctcacccccttc
gaagtgaaggtgggagtgtacaacaacaagggagacggacccttcagtggtgtggtcact
gtgtactctgcagagggggagcccagagaggccccatctgaggtgaaagcttccagcatt
tcctcttcggaaatcaaagtaacttggaggccacccaaccctggccctgggagaccacgg
ggatacgaggtgagctacacgaaggacagtgagcaggaggagtcagggaaccggaagaag
acagtggggaacgagacgtctatggtgctgacaggcctggaggggaacagcgtgtacctc
atcacagtcagaggcttcaacagtatcggccagggccctgcatcgaccgctagcaccgcc
aagaccaagaaagaccctccagtccagcctcctgccaaccttgtgtggattcaggaaggg
actaacgtatcattaaactgggacccggttaagtctaaagacaacgagtcagatgtcata
ggatacaaggtgttgttgagtcaggagggccgtgtccacaatcaggtgatgaggaccatc
accccatcggccgtcctctctctcccggagggaggcacctacatcattgaggtgcgggct
ttgagtgaggggggagagggagcaatcagctcccaagtcagagtactcacctcttcaggt
gtccgggtgaagagtggtcagcgttcagttcacagcctgctaccattgggtctgacatgg
ccatggactttggcattgctcctctctgttcctctcgtgccttcagcttcctggtga
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