Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385525
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Entry
139385525 CDS
T10872
Name
(RefSeq) progesterone receptor
KO
K08556
progesterone receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04114
Oocyte meiosis
ocla04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
139385525
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
139385525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139385525
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139385525
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
139385525
Nuclear receptors [BR:
ocla03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
139385525
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF1582
Motif
Other DBs
NCBI-GeneID:
139385525
NCBI-ProteinID:
XP_070986749
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Position
27:49552569..49601430
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AA seq
714 aa
AA seq
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MDTANTLSSDVTDSSKRVSYLIEKYKDVGFGQLRKFSKEPQSQVCMSSVVRSFGNVGTLC
AAPPGSSNNSAMFKDCTVRDNASLINKAFYDRSDPVRWTEVRGIEGVKDSTLPQPIPTVT
HESLQRAATNMISTPSSTTATGVCRIIKDEKEPSLIMETPCPDFDLTANIPTLESCYDSE
RKQQQLGFLDDSAASFPTSAPGQQHQQVLLDCSPNFLVDLNQNDQMSTVPQVRADSRGVP
FPTHPGKGMLSFDVMNSNGQGPQQHLMIYKSEMPRWSIQTSPTHSSFWCQSSGVSEDQYP
HHGYSSPDGIHTSALLQRSPTYTGYGGVPPQRLCMICGDEASGCHYGVLTCGSCKVFFKR
AVEGHHNYLCAGRNDCIVDKIRRKNCPACRLRKCYQAGMMLGGRKLKRFGALKAGPALMF
QGPLSALGDGLAPALMFQGPLSALGDGQTLASLPCMPGLNELQLSPQIISILESIEPEVV
YSGYDNSQPDMPHLLLNSLNRLCDRQLLWIVRWSKSLPGFRSLHINDQMTLIQYSWMNLM
VFSLGWRSFQNVTSEYLYFAPDLILSQDRMRRSPIYDLCLAMQFIPQEFTSLQVTKEEFL
CMKAIMILNTVPLEGLKSQAQFEEMRQNYIRELTKAIHLKERGMVASSQRFYHLTKLMDA
MHEIVKKVNLYCLSTYIQADAMKVEFPEMMSEVISSQLPKVLAGMVKTLLFHAK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggacacagcgaacacattgagctcagacgtcacagactccagtaaaagagtaagttat
ttgattgagaagtataaagatgtaggatttggtcagcttcggaaattctctaaggagcca
cagtctcaagtctgcatgtcctccgtagtgcgtagttttggaaacgttggcactttgtgc
gctgcgcctcctggctcaagcaacaacagtgccatgttcaaagactgtacggtcagagat
aacgcatcacttatcaataaagcgttttatgaccgctctgaccctgtgcgctggacagag
gtgcgtggtatagagggagtgaaagattccacgttaccgcagccgatcccaacagtaact
catgaaagtttgcagagagcggctacgaacatgatatcgacacccagttcaaccacagcc
accggggtctgtaggatcatcaaagatgagaaggagccgtcactaatcatggaaacaccg
tgtcccgattttgacctaacggccaacatccctaccctcgagagctgttatgacagcgag
aggaaacaacaacagttaggttttctggatgattccgcagcgtctttccccacctccgcg
cctggacaacagcaccaacaagtactattggactgttcaccgaactttctagtcgacttg
aatcagaacgaccagatgtcgacggttccccaggtccgtgcagactcacgtggtgttccc
tttcctactcatcccggtaagggcatgctgagttttgatgtaatgaacagtaacggacag
ggtccacagcagcatttgatgatttataagagtgaaatgcccagatggtccattcagacc
tctcctactcattcctcgttttggtgccagtccagcggggtctccgaggaccagtaccca
caccatggctactcctccccggatggaattcacacctcagccctgctccagaggtcccca
acctatacaggatatggcggtgttccaccccagagactatgtatgatctgtggagatgag
gcctcagggtgtcactatggggtcctcacatgtggaagctgcaaagtgttctttaaacga
gcggtcgaaggacatcataactatctctgtgctggtcgaaatgactgcatcgtggataaa
atacggagaaagaattgtcctgcgtgtcgcctgaggaagtgctaccaagctgggatgatg
ctcggagggcggaagctgaagcgttttggggccctgaaggcaggtccagccttgatgttc
caggggcccttatcagccctgggagatggtctggccccagccttgatgttccaggggccc
ttgtcagccctgggggatggtcagaccctggcctctctaccctgcatgcctggcctcaac
gagctgcagctctcccctcagatcatcagcattctggagagcattgagcctgaggtggtg
tactctggctatgacaactcccagcctgacatgccacacctcctcctcaacagtctcaac
agactgtgcgatagacagctgttgtggatcgtccggtggtccaagtctctgccagggttc
cgtagcctccacatcaacgaccagatgacactcatccaatactcctggatgaacctaatg
gtgttctctctgggctggagatctttccagaatgtcaccagtgaatacttatacttcgct
cctgatcttatccttagccaggatcgtatgaggagatctcccatatatgatctgtgtctg
gccatgcagttcattcctcaggagtttaccagcctccaagtcaccaaagaggagttcctc
tgtatgaaagccatcatgattctcaacactgttccattggagggtttaaagagccaggcc
cagtttgaggagatgagacagaactacattcgggagctgaccaaggctatccatctgaag
gagagaggcatggtggcctcctctcaacgtttctatcatctcaccaagctcatggatgcc
atgcatgagattgtgaagaaagtgaacctgtactgtcttagtacctacatccaggctgac
gccatgaaggttgagttccctgaaatgatgtcagaggtcatctcctcccagctccccaag
gtcctggccggcatggtcaagaccctcctcttccacgccaagtga
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