Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385531
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Entry
139385531 CDS
T10872
Name
(RefSeq) paired box protein Pax-3-like
KO
K09381
paired box protein 3/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139385531
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139385531
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GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_32
HTH_23
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
139385531
NCBI-ProteinID:
XP_070986760
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All DBs
Position
27:28761114..28791132
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AA seq
493 aa
AA seq
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MTALAGAIPRMMRPMLAQNYPHSGFPLEVSTPLGQGRMNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKGTTPDVEKRIEEY
KRDNPGMFSWEIRDKLLMDGICDRNTVPSVSSISRIMRSKFGGKGDDDDDEDEIEKKELE
EHERRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLDELERAFER
THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGASQLMAFNHLIPGGFPPSAMS
SLSPYQLSDSPYPPTSISQAVSEQPSTLHRPQPLPPSSGHHQSSGGGGQDVGSAYCLATG
RHGFSGYSDNFVTSGGPPNSQNPSNSNGLSSQVMGLLNPGGVPHQPQSDYALSPLTGGLE
PPGGMGASCSQRLEHLKGLEGLSSVPNIPSLPSLPNSQSYCPSSYSAPAYSVDPVASYQY
GQYHGQSKVPFII
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggcaggggcaataccaaggatgatgcgccccatgctggctcagaactac
ccacacagtggcttcccactggaagtttcaaccccgttaggccaaggtagaatgaaccag
ctcgggggagttttcataaatggcagacctttgcccaaccatatccgccataagatcgtc
gaaatggcccaccatggcatcaggccatgcgtaatctcccgtcagcttcgcgtctctcac
ggttgcgtttccaaaatcctctgccggtaccaggaaaccggctccatccgtcccggggcc
atcgggggaagcaaacccaaggggacgacacctgatgttgagaagagaatagaggagtac
aagcgtgacaacccgggtatgtttagctgggagattcgggataaattactgatggatggg
atatgtgaccggaacaccgttccatcagtgagctctatcagtcgcatcatgaggagtaaa
ttcggagggaagggagatgatgatgatgatgaagatgaaatcgagaaaaaggaattagaa
gaacacgaacggcgggccaaacacagcatcgagggcatcttaggagaccgatcaagccac
tcagatgaggggtcggacgtggagtcagaaccggacctgcctctgaagaggaagcagcgc
cgcagtagaaccaccttcacggccgaacagctggatgagctggagagagccttcgaacga
acacactaccctgacatctacacgagggaagagcttgctcagagggccaaactcacggag
gccagagtacaggtgtggttcagtaacagaagagcccggtggaggaagcaggctggagct
agtcagctcatggccttcaatcacctgatccctgggggcttcccgccctctgccatgtcc
agtctctcaccttatcagctgtctgacagcccgtatccccctacatccatatcacaagcg
gtgtcggagcagcccagcaccctgcatcggccccagcccctgcccccctcctcaggccac
caccagagctcaggtgggggagggcaggatgtggggtcggcctactgcctggccactgga
cgccacggcttctcaggctactcggacaactttgtcacgtcaggaggccctcccaactcc
cagaacccatccaacagcaatggcctctcttcccaggtgatgggtctgttgaacccaggc
ggggtgccccaccagccccagagtgactacgccctctcccccctgacaggaggcctggag
ccccccgggggcatgggggccagctgctcccagcgtctggagcatctcaagggtctggag
ggcctgtccagtgtccccaacatccccagtctcccctcgctgcccaactcccagtcctac
tgcccgtcctcctacagcgctcctgcctacagcgtggaccctgtggcctcctaccagtat
gggcagtaccacggacaaagtaaggtgcccttcattatctga
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