Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385575
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Entry
139385575 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139385575
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139385575
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139385575
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139385575
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139385575
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139385575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
139385575
NCBI-ProteinID:
XP_070986848
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All DBs
Position
27:44133932..44169898
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AA seq
884 aa
AA seq
DB search
MVKRRQKGPREDEVIDLTGPSCNHIRKGVDSSFLKKTGVDSACNSCQDCRGEESAAAVQA
PSEEMSETPTIWMCLKCGHRGCGRTSEDQHAIKHYEKPRSDPHCLVLSLDNWSVWCYICD
DDVQYSKTGHLAQLVNNIKKQALSEPRKQSPQRKHSIVKLEDSMIEEPQETKPEEKEENT
VTQPKENQKKNGKKENGLKESSSLPRGQKAVGGASSGAVGGVNSCALSVRGLSNLGNTCF
FNSVVQTLSQTQMLRQVINKVTAEEKTSVTISPGVSSDLEPILVQLGPPGSLTVAMCQIL
NEIQETKKGVVTPRELFSQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEMKRLNSGISE
ALKKHGRDAEQSKKLVKEYEKKGAPSNFVDQVFGGEMTSTVMCQQCKTVSLVKEMFLDLS
LPVSDQAYRKKSQKKGAGNQKASTEVKYNNGDSPSPVSMTNGDSDDLPTGSKYQQKKQKK
QAKKQAKNQRHQQKLVTLDSFTPPENTAESPVPAEEGEETGNSTQGEEEEPRVESQSSET
ERSETTPSEQDQEKPQGAGHTEKEEEDCEPVAVSNNHSTVMSEEQSHQSPEGVVKRDGHE
AEHRGEEEENDDGDAAQPSGDEEDTKLTDKLGELSLNEAFLASEDSDLELRCRDGDTSAE
METETKLEGKEYTVSHQDLKLAFHTLATRAAPENQECSVESCLYQFTEVENLTQNNSLLC
VTCTKRQTKNKAAEGSKKNVYTDALKQMLISSPPPVLTLHLKRFQQIGYSVCKVNSHVNF
PHILDVAPFCSVICKGVSEGGSQVLYSLYGIVEHSGTMRSGHYTAYVKARPFYPSTTHNG
VGTHGEPEPVKGAWFHVSDSSVQPVTESKVQSSQAYLLFYERIS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaggaggcagaaaggtcctagagaggacgaagtgatagacctgactggtccg
tcgtgcaaccatatccgtaaaggtgtagactccagcttcctgaagaagactggggtagac
tccgcctgtaacagctgccaagactgtaggggtgaagagtcggctgccgctgtacaggct
ccatcagaggagatgagcgaaacaccaacgatatggatgtgcttaaaatgcgggcaccga
gggtgtgggcgtacctctgaggatcagcatgctatcaagcactacgagaagcctcggtca
gaccctcactgtctggtgctcagcctggacaactggagcgtttggtgttacatctgtgat
gatgatgtccagtactctaaaacaggccatctggctcagttggtgaacaacattaagaaa
caggccttgtctgagccccggaaacaaagtccacagagaaagcattcaatagtgaagctg
gaggacagcatgatagaagagccacaggaaaccaagccagaagagaaggaagagaacaca
gtgacacaaccgaaagaaaaccagaagaagaacggcaagaaagaaaatggtttgaaagag
agcagcagtttacctagaggacagaaggccgtgggaggagccagcagcggtgcagtggga
ggagtcaacagctgtgcattgtcagttagaggactcagtaaccttggaaacacctgtttc
ttcaactctgttgttcagaccctctctcagacacagatgttgagacaggtcatcaacaag
gtgacagctgaagagaagaccagtgtcaccatctcacctggagtctcctcagacctggaa
cccatcctggtgcagctaggtcctccggggtctctgaccgtggcgatgtgtcagatcctg
aatgagatccaggagactaagaagggggtggtcaccccgagagaacttttcagtcaggtc
tgcaaaaaagcggcacgctttaaagggttccagcagcaggatagccaggagcttcttcgc
tacttgctggatgggatgagagccgaggagatgaaaagactgaactctggaatatcggaa
gcactgaaaaaacatggaagagatgcggaacaatcgaagaagttagtcaaggagtatgag
aagaagggagctcctagtaacttcgtagaccaggtgtttggtggggagatgaccagcacg
gtcatgtgtcagcaatgcaagacggtttctttggtcaaggagatgtttctggatctgtcc
cttcctgtctcagaccaggcctacaggaagaagagccagaagaaaggagcggggaaccag
aaggctagtactgaggtgaaatataataacggagacagccccagccctgtctccatgacc
aacggtgactccgacgaccttcctactggcagcaagtaccagcagaagaaacagaagaaa
caggccaagaaacaggccaagaaccagagacatcagcagaagctagtcaccctggacagc
ttcacacctccagagaacacagcagagagcccagtaccagcagaggagggggaggagaca
ggaaatagtacccagggagaggaggaggagcctcgggttgagagccaatcatcagagacc
gagaggtccgagaccactccctcagagcaggaccaagagaaacctcagggggcagggcac
acggagaaagaggaggaggattgtgaaccagtggctgtgtccaacaaccactccactgtg
atgtcagaagagcagagtcaccagtcccctgagggggttgtaaaaagagacggacacgag
gctgaacatagaggagaggaggaggagaatgatgatggtgatgcagcccaaccgtctgga
gatgaggaagacaccaaactgacagacaagctgggtgaactatctctgaacgaagccttc
ctagcctctgaggactcggacctggagctgaggtgcagagatggagacacgtctgctgag
atggaaacggagacaaagctggaggggaaggagtacacagtctctcaccaggatcttaaa
ctggcctttcacacgctggccaccagggcggcgccagagaaccaggagtgctctgtggag
tcctgtctctaccagttcacagaggtagagaacctcactcagaacaactctcttctctgt
gtcacctgcaccaagagacagaccaaaaacaaggctgcagaaggctccaagaagaatgtg
tacacagatgctctgaagcaaatgctgatctcgtctccccctccggtgcttactcttcac
ttgaagaggttccagcagattggatacagtgtgtgtaaggtgaacagccacgtcaacttc
cctcacattctagacgtagcaccattctgctctgtcatatgcaagggtgtgtcggaggga
ggctctcaggtgctctacagtctgtatggtatagtagaacacagtgggactatgagaagt
ggccattatacagcctacgtcaaagccagacctttctacccctccacgacacacaacgga
gtgggcacacatggcgagccagagccggtgaaaggggcgtggttccacgtgagtgacagc
agtgtgcagccagtcacggagagcaaagtgcagagctcccaagcctacctcctattctac
gagaggatctcctag
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