Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385576
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Entry
139385576 CDS
T10872
Name
(RefSeq) spartin-like isoform X1
KO
K19366
spartin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139385576
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Gene cluster
GFIT
Motif
Pfam:
Senescence
MIT
Motif
Other DBs
NCBI-GeneID:
139385576
NCBI-ProteinID:
XP_070986851
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Position
27:15672002..15682352
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AA seq
617 aa
AA seq
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MEEASQDAFDRARLQVIKDGYEKAFECINRGLTEDEAGHKAQALAQYTQGRQHLLRAISV
PSQGHECVGCSWESARQMQHKMQETLNNITTRLAVLETSPDPEFPPPLDASNGVPGTASN
SNLYPKLEKEKPERPSPPKLLMTNRQGGAVGGSVFPSLPLSPTRQSVVPGELPPAYSSQA
ADGHLTISYGTESGEMSLVGEEFYSLMSPSPPSPHSLGEDGEELFFLPHGVQIFFVTPDG
QVSAPSYPGYLRMVKFTSQQSERVPNRPPAFLQVCDWLYPLMATDSPVLLCNTGVFMFPD
MMASAPGSYVGVVLSSELSIEDRQLFQDLLSQMTDLRVQAPNEAADSINLSQKVSLAPLE
EEEAPAAAEEEEKNLPEWSEKVASGILTGASWLSWGLVKGAEFTGIAIQKGASKLREHIT
PEDKPAHVSPSVSKGLHVAKQATGGAVRVSQFLVDGVCMVAGCVGRELAPHVKKHGGKLV
PESMKKDKDGRSNIDGAMVVAASGVQGFTTMWTGLEVAAKNITVSVASETVNTVKHNPPP
LNSWLCVIIRYGAAAGQATDHAVNSAINMGVTAFNIDNLGIKAAVKKTGKQTAVAILEDY
QLRDPNTNQKQVEKRDK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagccagtcaagatgcctttgacagagccaggctgcaggtgatcaaagacggc
tatgagaaggcctttgagtgcatcaacaggggcctgaccgaggatgaagctggccacaag
gcccaggccctggcccagtacacacagggacgccaacacctcctcagggccatcagtgtg
ccctcacaggggcatgagtgtgtggggtgctcctgggagtcagcccgccagatgcagcac
aagatgcaggagactctgaacaacatcaccactcgattggcggtcctagagaccagccca
gaccctgagttcccaccacctctagatgcctctaatggagtccccgggacagcatctaac
tcaaacctctaccccaaactggagaaggagaaaccagagcggccgtctccacccaagctg
ctgatgactaaccgccaaggtggagctgtgggaggcagtgtgtttccctccttgcctctt
tctcccactagacagtctgtggtgcctggcgagctgcccccagcctactcttcccaggcg
gctgacggccacctgactatctcctacgggacagagtctggagaaatgtcgctggtggga
gaggagttctacagcctcatgtccccctctcccccctctcctcatagcctgggggaggat
ggagaggaactcttcttcctgcctcacggggtacagatattctttgtcacacctgacggc
caggtcagtgctccctcctacccagggtacctgcggatggtcaagttcaccagccagcag
tcagagagagtgcccaaccggcccccagccttcctgcaggtgtgtgattggctgtacccg
ctgatggccactgactcccccgtcctgctgtgtaacacaggggtgttcatgttccccgac
atgatggcgtctgccccggggtcctacgtgggcgttgtactgtcctctgaactgtctata
gaagacagacagctgttccaggacctgctgtcccagatgacagacctccgggtgcaggct
ccaaatgaggcagcagacagcatcaacctgagccagaaggtgtccctcgctcccctcgag
gaagaggaggccccagcagcagcagaggaggaggagaagaacctgccagagtggagtgag
aaagtggccagcggcatcctcacaggggcatcgtggctgagctggggcctggtgaagggg
gctgagttcactggcatagccatccagaagggggcgtccaaactgcgggagcacatcacc
ccagaggacaagccagcccacgtcagcccctctgtctccaagggattgcatgtagccaaa
caggccaccgggggcgctgtccgcgtcagccagttccttgtggacggtgtgtgtatggtg
gcagggtgtgtgggtagagagctagctccccacgtgaagaaacatggaggcaagttggtc
ccggagtccatgaagaaagacaaagatggacgatccaacattgatggagccatggtggtg
gctgctagcggagttcaaggcttcactaccatgtggactggcttggaagtagcagcaaag
aacatcaccgtctctgttgcctccgaaaccgtcaacactgtcaagcataaccctccccct
ctcaacagttggttgtgtgtgattataaggtatggcgctgcagccggccaggccacagac
catgctgtgaactcagccattaacatgggtgtcaccgccttcaacattgacaacctgggc
attaaagctgcggtgaagaagactggcaaacagacggccgtggccatcctggaggactac
cagctacgggaccctaatactaaccagaaacaagtagagaaacgggacaaatag
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