Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385617
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Entry
139385617 CDS
T10872
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139385617
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139385617
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139385617
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139385617
Intermediate filaments
Intermediate filament-binding proteins
139385617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
139385617
NCBI-ProteinID:
XP_070986932
LinkDB
All DBs
Position
27:complement(8022468..8085377)
Genome browser
AA seq
2724 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLASSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQGIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDSAID
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVQTLNTAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRCSELEESQHLWAFFQEVEESEAWIREKSSI
LAAQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVREAVDKHRLHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYTEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEPFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVQ
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPAT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMAGDTSRDETQKLHKKWLKHQAFM
AELAQNKEWLEKIEREGQQLIQEKPELGPVVRRKLGEIHECWQDLESTTQAKARQLFEAN
RADLLVQSYTSLDHQLHQLEGQLGYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASVPQHGQVTDTVSKHQSAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQQLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPQAD
CVRAGLEQLSRLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKRQCQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNREVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREVLAQIDDKQRRLPEVRARQGGTANTSTLQRLMQSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPRDVSSVEVLMNYHQSLKSEVEARSKSVLQCIEMGKTLLA
ARNPAAEEIKEKLDTVVAKQYELSEKWDKHWEVLQHMLEVHQFAQEAVVAEAWLTAQEPF
INSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKMKAEQSKLPPTPLLG
RKVFLDPQETSPARSQGSPLMRRILYEQAEPRAERPPQEPSPSSVARRLGSTVANYTPIM
NGSSGYRSSLEARAMPMMGGVAGGVVGVAARLGTATVEATHLGTTAAMEVRGVAAGFGTA
ASEARGLAAGLVTPAVEAKGIAASLVTGAAAAVEVKASQYLRQPKIKHMDDMVTPMLVAC
RLEKAREKEVREREQRERERDIVLMEPAPVMPVMAEVVLQEMGREGMGRERLNSEPSSRD
HRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEALMIQARRDELPQEVWRERAER
KERKLERQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQSDRRSTEKKSGGQTLFDI
VEQLKEREAATARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRRRPRPKDPSAGEATTRR
SRSAPEPGVAQGVSPSVPQPPSHTAHHEGFLFRKLDIETMRKSSNRSWVNLYCVLNKGEI
GFYKDAKNTATPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKTKDGSEFLFHAKDEDDLK
AWTTNINKSIAEHEEIAKWGQPQPTTSSTDEGTRRDGSKADNKSERGEKSDRGERPQRAE
RSERSDKGETKSDTKRSEKSSKNK
NT seq
8175 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagatctggacaacgcggaggcccagcgccagctcaacaacaac
aacacccgtctggccagcagctcgggacactgggaaaccgaggtcaccagctccaaactg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggccagagtgtcctgtcggattgctgacctctac
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcggatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgcctcacccttggcctcatctggaccatcatccttcgcttccagatc
caggggattaagatcgagtgtgacgacaacagggagactcggtcggcaaaggatgcccta
ctactctggtgccagatgaaaaccgctgggtactctgaggtcaacatccagaacttcacc
acgtgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgagttccataagctgatccggtccaatgccacacacaacctccagcaagccttcaac
attgctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacggag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtcttggacagtgccattgac
ggtcagaagatgatcgatcgatatgaggctctggcctcagagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
caacttcaagccttcaccacctactgcaccatcgaaaagcccatcaagtttcaggagaag
gggaacctggaggtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgccccatgaagggaaactcatctctgatatcaataaggcgtgggagaggctg
gagaaggcggagcacgagagaggcgtggcactacggcaggagctgattcgccaggagaag
ctggagttgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaat
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgcctgcggtggaagcc
gccatgaagaagcacgaggccattgaggcggacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactacgacatccggcgcatc
tcggcccgaaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggctggagaagaacctggccctgcagaagaccttccaggacatggtctac
atgatcgactggatggaggacatgcaggtccagctcctttccaaagacttcggcaagcat
ctgctggaggtggatgacctgctgcagaaacacagcctccaggaagctgacatcacagtg
caggcagagagggtgcagacccttaacacagccgctctcaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccacgtcagcacctgcctg
gaggagctcaagcagctggcagccaagcggtgctcggagctggaggagtctcagcacctt
tgggccttcttccaggaggtggaggagtctgaggcctggatccgcgagaagagctccatc
ctggccgcccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggcaagcagatcctgatggagaagagttttggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggatcaggcggcgcagagactgggccacctg
caggaggcactcaacttcttccagttcagcacagagacggatgacttgttggcatggctg
caggacgcctaccgtctagtgtccagcgaggacttcggccatgacgagtactccacccag
tcactgctcaagaagcaccggggcgtgcgcgaggccgtggacaagcaccggctgcatgta
gtaactctgcgcaaacacatggtggcgctgccactgcactaccgggagctggacgaggtg
cagtcaagaatgggcgaggcggagcagctgtacaccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtggaggtcatagcccataggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggtcagaggctgtcaggaccatctcaacagcagatggaaccgcatc
gtggagatggtggagcagaagaaggaccacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtcccagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtggggagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctagccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gaactggccatctcgcacccggccaaggccatggaggtcctggagcccttcgagggtatc
agtgtagagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactcctttctgacgtggctggtgcag
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaggaagactacgagcgg
ctgcaggcggtcaacgagctgctggaggccgaggaggcgccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctagagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gcagaggccttcctcaacaaccaggagtcagccttggcccacgttgagctccccgccacg
gtggagacggtggaggctgccatcaagaagcacaaggactttaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctcgctaacagaggcaaccagaac
cgggagctggcccaacagtggctggagaggctcaacggccagtgggggctccagagatta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctggtgac
acatcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggcctttatg
gccgagctggcccagaacaaggagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgggcccggtggtgcggaggaagctgggggagatccacgag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggctgacctgctggtgcagagctacaccagcctggaccatcagctgcaccagctggag
ggacaactgggctacgtggaccagggtcaggacctgaccagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccgtcccccagcacggccaggtcacggacacagtcagcaagcaccag
tccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacgtctcaggagcacggctccagcctccaggctgtg
cagcagctcatgaagaagaaccagactctgcagagggagctacagggccatcgggcgagg
gtggaggacgtcctggaaagagctaacgtcatcgcctccatccgcagcccccaggctgac
tgtgtgcgggcgggcctggagcagctcagcaggctgtggggtctgctgtgggccgagacg
gagagaagacagctggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaaggga
aaggatgagcctagcaccctgcagctactgaagaagcacctggtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcaggcagctactggagatg
ggacatccagacagtgagcagatcagtaagcgtcagtgtcagatggaccggctgtacgtg
tctctaaaggacctggtggaggagagaaagtctcgtctggagcagcagtactggctctac
cagctcaaccgcgaggtggacgagctggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggacgagctgatcgactacggccacgccgacgccgccaccatcgccgagtggaaggac
ggcgtgaacgaggcctgggccgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccagcttcacaagttcttcaccgactgccgcgaggtcttggcccaaatc
gatgataagcagcggaggttgcccgaggtgcgggcgcgccagggtggcacagccaacacc
agcaccctgcagaggctcatgcagagcttcgagcacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggccatcgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacttcc
tgcgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagggatgtgtcctcagtggaggtactgatgaactaccaccagagcttgaagagcgag
gtggaggcgcgcagtaagagtgtgctgcagtgcatcgagatgggcaagacgctgctggcc
gcgcgcaaccctgctgctgaggagatcaaggagaagctggatacggtggtggccaagcag
tacgagctgtctgagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtg
caccagtttgcccaggaagcggtggtggccgaggcctggctcacagcccaggagcccttc
atcaacagcaaggagttgggcgccagcgtggacgaggtggagcagctcatccgccgccac
gaggccttccgcaaggccgccgccacctgggaggagcgcttcagctcgctacgacgcctc
accacggtggagaagatgaaagcggagcagagtaagctccctcccacccccctgctgggt
cgaaaggtgttcctggacccccaggagacgtcccctgcccggagccagggctcccccctg
atgagacggatcctttacgaacaggccgagcccagagccgaaaggcccccccaggaaccc
tcgccctcttccgtggcccgccgcctgggctccaccgtagccaactacacccccatcatg
aacggctccagtggctaccgcagcagtctggaggcccgggccatgcccatgatgggggga
gtggctgggggtgtagtcggggtggcagccaggctgggaacagccactgtggaggcaaca
catttagggaccaccgccgccatggaggtccgaggggtggcagcaggatttgggactgcc
gcctctgaagccagagggttggcagcaggattggtcacccccgcggtcgaggccaaaggg
atagctgcaagcttggtgactggggcagccgccgcagtggaggtgaaagcctcgcagtac
ctccggcagcctaagatcaaacacatggacgacatggtgacgcccatgctggtggcctgt
aggctggagaaggcgagagagaaggaggtgcgagagagggagcagagagagagggagaga
gatattgtgttaatggagccagcgcccgtgatgccggtgatggccgaggtggtgctccag
gagatggggagggaggggatgggcagggagaggctgaacagcgagcccagcagcagagac
caccgggcggggagcagccggtcggagccccagcagagagacagggacagagacagtagg
gacagtagggacagtcacagggaagccaggctggagcgccagcactctagtgaggcgctg
atgatccaggcgcggcgggatgagctgccccaggaggtgtggcgggaacgggccgagcgc
aaagagaggaagctggaaaggcagacgtccagcgagcaggagggccacggacacgagggc
cggaggaaagaccgccaccggacggagagacaggagtccagtgaacacgacacagccaag
gagcagtcagacagacgttctacggagaaaaagtcaggtggccagaccttgtttgatata
gtggagcagctaaaagagagagaggcagcaacggcacgaggggaggtccctaaagtgccg
aacggcgtgccagagaagtcttccggacgtccagaccggccgcgagcacgggatcgtcct
aagccccggcggagaccccggcccaaggacccatctgcaggagaggccaccacccggcgg
tcacgctcggcgccggagccaggggtggctcagggcgtgagcccttcggtcccccagcct
cccagccacacagcccaccacgagggcttcctcttccgcaagctggacatcgagaccatg
aggaagagctctaacagatcctgggtcaacctgtactgtgtgctgaacaaaggagagata
ggcttctataaggacgctaagaacaccgccacaccttacaacaacgagcccatgctcaac
ctcggccactgccactgcgacgtcacccttggatacaagaagaagaaaaacgtctttact
cttaaaacgaaagacggaagtgaatttctgttccacgcaaaggatgaggatgatctaaag
gcctggaccaccaacatcaacaagagcatcgcagagcatgaggagattgccaaatggggt
cagccccagcctactacctcatccacggacgagggcacgcgccgcgacggcagcaaggcc
gataacaagtcagagcggggagaaaagtcagaccggggggaaaggccgcagagagccgag
cgctctgagaggtcggataagggtgagaccaaatcggacaccaagcgttcagaaaagtcc
agcaagaataaatga
DBGET
integrated database retrieval system
