Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385648
Help
Entry
139385648 CDS
T10872
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139385648
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139385648
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
139385648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
139385648
NCBI-ProteinID:
XP_070986979
LinkDB
All DBs
Position
27:9586522..9627668
Genome browser
AA seq
644 aa
AA seq
DB search
MEMTQSVVMDRENEGGEKEKGEESSQENGRLMLADGGVAEKGDPKVNSGGGSGGVSNGYP
TSTAQSPKEGAGGVPTGAPRTLVVQQTSLDRPRETWSKKMDFLLSVIGYAVDLGNVWRFP
YICYQNGGGAFLLPYMLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGVGFAIC
IIALYIAFYYNTIMAWALYYLLASFRPTLPWTTCSNPWNTVNCLRYLSTDSNITWTNTST
SPAEEFYTRQVLQVHLSPGLHQLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTA
TFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWGKLLSTTVWIDAAAQIFFSLGPGFGVLL
AFASYNPFHNNCYKDALVTSSVNCLTSFLSGFVIFTVLGYMAEMRKIGVETVAKDAGPSL
LFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPQLLSRRRELF
VLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTSRFCADV
NMMLGFSPGLFWRVCWVAICPIFLLFIIVSFLAFPPEVKLFDYIYPPWTTVLGYCIGVSS
FICVPAYMVYHLLTAKGTFKQRLLNGITPVPSGPHSDIIITHAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacgcagtcagtggtgatggacagagagaacgaaggcggagagaaagagaaa
ggggaggagtcatcgcaagagaacggcagactcatgctggctgacggaggggtggccgag
aagggggaccccaaagtgaactctggtggggggtcaggaggggtgtccaacgggtacccc
acgtccacagcgcagagcccaaaggagggagcgggaggtgtacccacaggggcccccagg
actctagtggtccagcagaccagtctggaccggccccgggagacctggagcaagaagatg
gactttctgttgtctgtgattggctacgccgtggacctgggaaatgtgtggcgcttcccc
tacatctgctatcaaaatggcggaggtgccttcctgctgccctacatgttgatggcggta
ttcggcggcgtgcctctgttctacatggagctggcactggggcagttccaccgcagcggc
tgcatctccatctggaaacacatctgccccatcttcaagggtgtgggcttcgccatctgc
atcatagcgctgtacattgcgttctactacaacaccatcatggcgtgggccctgtactac
ctgctggcgtcgttccggcccaccctgccctggaccacgtgctccaacccctggaacacg
gtcaactgtctccgctacctgtccaccgacagcaacatcacctggaccaacacgtccacc
tcgcccgccgaggagttctatacgcgtcaggtactgcaggtacacctgtctccaggtcta
caccagctaggcagtgtgagttggcagctggctctctgcctcctgttcatcttcaccatc
gtctacttcagcatctggaagggagtcaagacctctggcaaggtggtgtgggtgacagcc
accttcccctaccttgtcttgctggtgctgctcgttcgtggggccactctgcccggggcc
tggaggggcgtggtcttctacctcaaacctgattgggggaaactactcagcaccacagta
tggattgatgctgcagctcagatcttcttctctctgggaccaggttttggggtgctcctg
gcctttgccagctacaacccctttcacaacaactgctacaaggatgcgttggtgaccagc
tcggtgaactgcctgaccagtttcctctctgggtttgtcatctttactgtgctcggctac
atggctgagatgcgcaaaataggcgtggagacagtagccaaggatgctggtcccagtctg
ctgttcatcatctatgctgaagccatcgccaacatgcccgctgccaccttcttcgccatc
atcttcttcctcatgatcatcatgctggggctggacagcacgtttgccggtctggagggg
gtgatcacagccatgctggatgagttcccccaattgttgtctaggaggagggagttgttt
gtcctgggtctggtgtgtgtctgctacctgggagcgctctccaccctcacctacggaggt
gcgtttgtggtgaaactgtttgaggagtacgccacaggacctgctgtcatcactgtggtc
ttcctagaagtcatcgctgtttcctggttctacggcaccagtcgtttctgcgctgatgtc
aatatgatgctgggcttctcccctggactattctggagggtgtgctgggtagccatctgc
cccatcttcctactgttcatcattgtcagtttcctggcgttccccccggaggtcaagttg
tttgactacatctacccaccctggaccacagttctgggctactgcatcggagtgtcctcc
ttcatctgtgtaccagcctacatggtgtaccacctgctcactgccaaagggacctttaaa
cagcgtctcctgaatggcatcacccctgtacccagtgggcctcacagtgacattatcatc
acccacgccgtctga
DBGET
integrated database retrieval system
