Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385665
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Entry
139385665 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family F member 3-like
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ocla03012
]
139385665
Translation factors [BR:
ocla03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
139385665
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
PWI_ABCF3
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
RsgA_GTPase
nSTAND_NTPase5
AAA
MMR_HSR1
NACHT
AAA_15
AAA_16
DUF1672
ATP-synt_ab
ORC-CDC6-like
AAA_23
DUF87
TXNDC16_3rd
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
139385665
NCBI-ProteinID:
XP_070987014
LinkDB
All DBs
Position
27:complement(1370743..1394929)
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AA seq
722 aa
AA seq
DB search
MRCSCGXSRCIMATYVDILKSEFPEIDTEVFEYITGVLDCGGVEFEDGEEVYDAIGGLLQ
GSSADCKNEDDIRDICQQMFNTLKLSNGHAASKQVLLDAPVRLSQISSECVSVTNDVQGI
WMMKRGQNTTVDARKLEKAEAKLKQKQGRRNERDSQKTTNPLVLEEASASQASSKKDSRV
DLSGKNRSYDIRIENFDVSFGERSLLQGAELSLSTGRRYGLIGRNGLGKTTLLKMLASRS
LRVPAHITILHVEQEVAGDDTGALQSVLESDTVREGLLTEERLLNARIANGTAEGMETVR
LSEIYAKLEEIEADKAPARASIILCGLGFSPKMQTQTTKEFSGGWRMRLALARALFAKPD
LLLLDEPTNMLDVRAILWLENYLQTWQTTILVVSHDRNFLNAVVTDIIHLHSQRLESYRG
DYENFVKTKEDRLKNQQREYEAQFQYREHIQVFIDRFRYNANRAAQVQSKLKLLEKLPEL
KPLEKETEVTLKFPDNFEKLSPPVLQLDEVEFYYNTDQRLFTQLSVSADLESRICIVGEN
GAGKSTMLKLLMGELTPVNGIRHAHRNLKIGYFSQHHVDQLDLNVCSIELLLNKFPGRNE
EEYRHQLGGYGITGELATRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIE
ALAKALNKFKGGVVLVSHDERLIRMVCRELWVCEHGNVRRVEGGFDEYRDILQEQFRKEG
YL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgttcttgtgganagagccggtgtatcatggcgacatacgtggatattctgaag
agcgagtttcccgaaattgacaccgaagtgttcgaatatatcacgggtgtgttggactgt
ggaggggtggagtttgaggatggagaggaggtgtatgatgcgattggagggctgttgcag
gggtcgtcggctgactgtaaaaacgaggatgacattcgggacatctgtcagcagatgttc
aacactcttaaactgagtaacggccatgccgcttcaaagcaagtgctgctcgacgctccg
gtgcggttgtctcagatatcttcagagtgtgtatctgtcactaacgatgtccaagggatc
tggatgatgaagaggggccagaatacaactgtggacgcgaggaagctagagaaggccgaa
gccaagctgaagcaaaagcaagggagaaggaatgaacgggattcgcaaaaaacgactaat
ccgctggtactggaggaggcatcagccagccaggccagtagcaagaaagacagccgtgtc
gacttgtccgggaagaatcgcagctacgatatccgcatcgagaactttgacgtgtcgttt
ggcgagaggtctttgctgcagggggcggagctgtctctgtcaacaggtcgccgctacggc
ctgattggccgcaacggcctggggaagaccacgctgctaaagatgctggcgagccgcagc
ctgcgtgtccctgcccacatcacaatcctgcacgtggagcaggaggtcgctggagacgac
acaggggcacttcagagcgtgctggagagcgacacggtccgggagggtctcctgacagag
gaacgcctgctcaatgcgcgcatagccaacggaactgctgaaggaatggaaactgttcga
ctgtcggagatctatgctaaactggaggagattgaagcagacaaggcacctgcccgagct
tcaatcatcctatgtggtttaggtttttctcctaaaatgcaaacgcagacaaccaaggag
ttttctggaggctggaggatgagattagctctggctagagctctctttgccaagcctgat
cttttgttacttgacgagcccaccaacatgttggatgtccgagccattctttggctggag
aattacctgcagacctggcagaccaccatcctggtggtgtcccacgaccggaacttcctc
aacgccgtggtgactgacatcatccacctgcactcgcagcggctggagagttaccgcggc
gactacgagaactttgtcaagaccaaagaggaccgcctgaagaaccagcagagggagtac
gaggcccagtttcagtacagagagcacatccaggtgtttatcgaccggttcagatacaac
gccaacagagcggcacaggtgcagagcaaactgaagctcttagaaaaactgcctgaactc
aaacctctggagaaggaaaccgaagtcaccttaaagttccctgataactttgagaagctg
tctcccccggtgctccagttggatgaggtggagttctactataacactgaccagcgcctc
ttcacacagctgtctgtgtctgcagacctggagtctcgcatctgcatcgtgggtgagaac
ggggcgggtaaatccaccatgctcaagctactgatgggagagttaacgcctgtcaacggc
atcagacacgcccatcggaacctgaagatcggttatttcagtcagcaccacgtggatcaa
ctggacctcaatgtgtgttcaattgagctgctactcaacaaattcccaggtcgtaacgag
gaggagtacaggcaccaactgggtggctatgggataaccggtgagctggcaactcggcca
gtggccagtctgtcaggagggcagaagagccgggtggccttcgctcagatgaccatgcct
tgcccaaacttctatatccttgacgagccgaccaatcacctggacatggaaacgatcgag
gcgctagcgaaggcactcaacaaattcaaaggtggggtggtccttgtctctcacgacgag
cgtctgatccggatggtgtgcagagagctgtgggtctgtgagcacgggaacgtgcggcga
gtggaggggggctttgacgagtaccgggatatcttgcaggaacagttccgcaaggagggc
tacctgtga
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