Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385679
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Entry
139385679 CDS
T10872
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
139385679
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
139385679
NCBI-ProteinID:
XP_070987047
LinkDB
All DBs
Position
27:7931288..7998278
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AA seq
1963 aa
AA seq
DB search
MVITTTALSPTTTLSPTTVIPNTTPVPTETTAAWRTEGTPVSTVRWKPLTLQEAQSVLLK
KALARGGRGDKMTSILMKHIETERKKLQSASPSDLQDTRTTSVKSFHTQKGQYTIHVSPP
AARNQTAGHRGGTAAGAGRRGAERIKVLFTPTVCKVRCTQGRCTNFCEQGNVTALYISEQ
GDRAALGPGFRVFLCPMLCQNGGVCIQKDRCLCPPTFTGKFCHIPVATPSTNDIEKPPRI
PSVLASQQLLSQSEYILPLQSQHQSHSQPSGASGSSMVKVRVQHPPEASVKIHQVLKVGY
GPGTVREQSETVTWSAAAAATPPKPRVQAQTLHGNSTNTESSVFKYCFREVRNGQCISPL
PGLRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGSCPAGFERINGTQCVDVNECLQPGF
CENGNCVNTRGSYSCVCRQGYILDASHGICISHRVISEDKDQCYRILNSGSGRGSCSVPI
LRNITKQICCCSRVGKAWGENCERCPYFGSVAFKEICPAGPGYHYSASVIQFNQRLLEQH
GTGGPPVISQSTGQTRPQQPASSGAQTPQTSHQQPGITTLLTTPTRPQQPGGGALTLQTR
PQQPSVEQWSSESSLSSQSRPHIPASSVTAGPTRVVTARPLTQTQWPPVDRRPVSPVRPA
QPLPPLVTPRPPIPRPVRGVCETMPQVCGQGRCVNQPGGRHTCICNEGHQLNAQQIRCQD
IDECRASPPPCGSGHCQNTEGGYRCSCPSGYQPGPRGTSCIDIDECRQVPNPCNNGRCEN
IPGSFKCVCRTGYTLEGNACKDVDECEDPLRCPVQACANSPGSYKCVSCPPGFGLLNEQC
SDVDECHQTPSLCTNGRCENTPGSYRCVCHTGYKLQGKTCTDVDECEDPLRCPGQACVNS
QGSYNCVSCKPGFSMINGHCSDIDECRQTPSPCTTGHCENTQGSYSCACLTGYRLHGDTC
TDVDECADPSQCPGQECVNSLGSYKCVSCKPGFGLVDRHCTDVDECLHSPTPCANGRCEN
TAGSYKCACRSGFRLQGNTCGDVDECENALQCPGRECINSEGSFICVACSPGFEAGNGQC
TDIDECRQTSNLCANGRCENTPGSYRCVCRTGFKPQGSICIDLDECEDPSQCPGQRCVNS
EGSYKCIACKAGHGMRDGLCADVDECQSPDTCGAARLCVNTDGSYRCDCQPGYRTAGLGR
QCRDVNECLEGEYCFPRGECVNTEGSYRCVCSQGYTTSSDGGSCLDVDECARSGPGACQD
GRCVNTEGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCRSQRCENTVGSYRCITSCEPG
YRVTRTGECVDINECANETVCGEHAFCQNLIGTYQCMCDQGYTATSDGKGCVDENECETM
QGVCGAARCENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGRPAYPGGSSSSSSSSTTGL
GPQRRPDASQLPLARPGEFRECYYSTGEQSSCSVLARNTTQQECCCTVGQGWGMGCQYDP
CPPLGTAEHQALCPSGRGYVTGSGAFSYKDVDECKLFHPEVCKNGVCVNNIPGYSCYCTI
GYYYDDVFLECIDVDECEAGEDSCPGGICVNILGSHVCTCEPPLVLDDTHRSCVNSTDLA
VDENLSFCWQFVTADLVCQSPLLGGQVTFTECCCLYGEGWGLHCALCPARDSEDYEARCN
VFLGPPEFPPPFPDPYGPDPGPGPGRGGEGGGGVGYRVPYGPDSFPDPIPRRPEYPQPDY
DDYTPAGGSRSGFRSRTPSTFSVPESPYRRPSGYIPERYYDEDDYGPPDAPPRPHLRTLP
DPRSELAFGARPPPPIREGLPLSLAPLSDSDPYSEEEERPEPWRVGPPFPPFPDRQGPGG
GGGPRRVYERRYEPYAGLSTEDCGILHGCENGRCIRVAEGYTCDCYEGYELDMTSMACID
INECVNPDNACANGRCVDTDGSYRCVCHRGYVMSRRPNHCVAA
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcaccaccaccgccctttcaccaaccaccaccctctcaccaaccaccgtcatc
cccaacaccaccccagtgcccactgagaccacagctgcatggaggacagaggggacacca
gtcagcactgtgcgctggaaacctcttactctgcaggaggctcagtcagtgctgctaaag
aaggcattggcccgtgggggccgaggcgacaagatgacctccatcctgatgaaacacatt
gagacagagcggaagaagcttcaatcagcctcaccgtcagacctacaggacacccggacc
accagtgtcaagagcttccacacccagaagggccagtacaccatccacgtgagcccgcct
gcagccagaaaccagaccgccggccaccgaggaggaacggcagcaggggcaggaaggaga
ggagctgagcgcatcaaggtgctcttcaccccgaccgtctgcaaggtgcgctgcacccag
ggacgctgcaccaacttctgcgagcagggcaatgtgaccgccctctacatcagtgaacag
ggggaccgggctgcgctgggaccgggcttcagagtcttcctgtgccccatgttgtgtcag
aacggaggggtctgcatccagaaggaccgctgcctctgcccgccaaccttcaccggcaag
ttctgccacatccccgtggccacgccctccaccaatgacattgagaagcctccgcgcatc
ccctcggtgctggccagtcagcagctgctgtcccagtcggagtacattctccccctgcag
agccagcatcagagccacagtcagcccagcggtgcatctggctcatccatggtgaaggtg
cgggtgcagcacccaccagaggccagcgtgaagatccaccaggtgctgaaggtgggctat
gggccaggcacggttagggagcagtcggagacggtcacctggtcagccgcagccgcagcc
acaccacctaaacccagagtccaggcccagaccctccacggtaactccaccaacacagaa
tcttctgtgttcaagtactgcttcagggaggtccgcaacggccagtgcatctcacctctc
ccaggactcaggagtcaggacacctgctgccgagggattggattggcctggggcatcaac
gagtgtgtcctatgtccccctaacacaggaaatggagtcgatgggagctgtccggctgga
tttgagaggatcaacggcacccagtgtgttgatgttaatgagtgtttgcagccaggcttc
tgtgagaacggcaactgtgtgaacactcgagggagctacagttgtgtctgcaggcaagga
tacatactggacgcctctcacgggatctgtatctcccatagggtgatctcggaggataag
gaccagtgctatcgtatcctgaactctggctctggccgtggtagctgctccgtgcctatc
cttaggaacatcaccaagcagatctgctgctgcagccgcgtgggcaaggcctggggagag
aactgtgagaggtgtccctactttggatcagttgctttcaaggagatctgcccagcaggg
cctggctaccactactctgcctctgtcatccagttcaaccagaggttgctggagcagcac
gggactggaggtccccctgtcatatcccagagcacgggacagaccaggccacaacaacca
gccagtagtggtgcacagactccccaaactagtcaccaacaaccaggtatcactactctg
ctcaccactccgaccagaccccaacagccaggtggtggcgctctcacgcttcagaccaga
ccccagcagccatcagtggagcagtggagcagtgaaagctccctgtcctcccagagcaga
ccacacattccagccagctctgttacagcaggacccacccgggtggtgaccgctcggccc
ctcactcagacccaatggcctccagttgaccgacggccagtatctccagtgagacctgcc
cagcccctcccacctctggtcacgccccgcccacccatccccaggccagtgcggggtgtg
tgtgagaccatgccccaggtgtgtggacagggccgttgtgtgaaccagcccggagggaga
catacctgcatctgtaacgagggacaccaactcaacgctcagcagattcggtgtcaagac
atagacgagtgcagggcgtctcctccgccctgcggcagcggccactgccagaacacagaa
gggggctacaggtgcagctgcccctctggataccagccgggaccccggggcaccagctgt
atagatattgacgagtgtcgtcaggttccgaacccctgtaacaacggtcgctgtgagaat
atccctggtagcttcaaatgtgtctgccgcactgggtacacgctagagggaaacgcatgt
aaagatgtggatgagtgtgaggaccccttgaggtgtcctgttcaggcctgtgccaactct
ccaggatcatacaagtgtgtgtcttgcccgccaggctttggcctgctcaacgaacaatgc
tcagatgttgacgagtgccatcagacccccagcctttgcaccaatggtcgttgtgagaac
actcctgggagctacaggtgtgtttgccacacaggatacaaactacaaggcaagacctgc
acagatgtggatgagtgtgaggaccctttgaggtgtcctggtcaggcctgtgtcaactct
cagggttcttacaactgtgtgtcctgcaagccaggcttcagcatgatcaatggacattgc
tcagatatagatgagtgtcgtcagacccccagcccatgcaccaccggtcactgcgagaac
acccagggtagctacagctgtgcgtgtctcactggctacagactacacggcgatacctgt
acagacgtggatgaatgtgcagacccatcccagtgccctggccaggagtgtgtcaactcc
ctgggctcatacaagtgtgtgtcctgcaagccaggctttgggctggtcgacagacactgc
acagatgttgatgagtgcctccacagccccactccctgtgctaacggccgttgtgagaat
acggctggaagctacaagtgtgcgtgccgttctggcttcaggctacagggcaacacctgc
ggagatgtcgatgagtgtgagaacgctctgcagtgtcctggtcgggagtgtatcaactct
gagggctccttcatatgtgtggcctgtagcccaggctttgaggctggaaacggacagtgt
acagatatcgatgagtgtcgccagacctccaacctatgtgccaacggtcgctgtgaaaac
actccgggtagctaccggtgtgtttgtcgcaccgggttcaaaccgcagggcagcatctgt
attgacctggatgaatgtgaagacccctcacagtgtcctgggcaacggtgtgtgaattct
gaaggctcctacaagtgtatcgcctgcaaagcgggccacggcatgcgagatgggttatgc
gcagatgtggatgaatgccagagccctgacacctgtggtgcagcgaggctgtgcgtgaac
acggacggctcctaccgttgtgactgtcagccaggctacagaaccgctggcctcgggcgc
cagtgtagagacgtcaacgagtgtctagagggggagtactgcttccccaggggagagtgt
gtgaacacagagggctcctaccgctgtgtgtgctcccagggatacaccaccagcagcgac
ggcggctcctgcctggatgtggatgagtgtgccaggtcaggcccgggggcgtgccaggat
ggccgctgtgtcaacacagagggctcctaccagtgccagtgccaagtgggattcaccacc
aacccagagaagacagcctgtctggatgtagatgagtgctcagagggagcagtgtgtcgg
tcacagcgttgtgagaacaccgttggctcctaccgctgtatcacctcctgtgagccgggc
taccgggtcacccgcaccggagagtgtgtcgatatcaatgagtgtgccaatgagaccgta
tgcggggagcatgcgttctgccagaacctaattggaacataccagtgcatgtgtgaccag
ggctacacagccaccagcgatgggaagggatgtgtggatgaaaacgagtgtgagactatg
cagggcgtgtgtggcgcggcgcgctgtgagaatgtggatggctccttcatgtgtgagtgt
ccaggagagggggaagagtttgatacgcgctcaggacagtgcctcagcactccccgacca
ggtcgtccggcgtaccctggcggctcctcctcttcttcgtcttcctccaccaccggtctc
ggtccccagcgccggcccgatgcgtcccagctgccccttgcccggcctggcgagttcagg
gagtgttactacagcaccggggagcagagctcgtgcagcgtcctggcccgcaacaccacc
cagcaggagtgctgctgcaccgtgggccagggctggggcatgggctgccagtatgacccc
tgtcctccgctaggcacagctgagcaccaggcgttgtgccccagcggacgaggatatgtt
accgggtcaggagcatttagctacaaagatgtggatgagtgtaaactgttccaccctgag
gtgtgtaagaacggtgtatgtgtcaacaacatccctggctactcctgctactgcaccatt
ggctactactacgacgatgtgtttctggagtgcatcgatgttgatgagtgtgaggcaggg
gaggacagctgtccagggggaatctgcgtcaacatattaggctcacacgtctgtacctgc
gagcctcctcttgtgttggacgacactcatcgcagctgtgtcaattccactgacctcgcc
gtggatgagaacctatcgttctgctggcagtttgtcacagcagacctggtgtgtcagagc
cccctgctgggtggacaggtcaccttcactgagtgctgctgtctgtatggagagggctgg
ggactgcattgtgctctgtgtcctgccagagactcagaggactatgaggctcgctgtaac
gtcttcctggggcccccagagtttcctccccccttccctgacccctacgggccggaccca
gggccaggacccggcagaggaggagagggaggaggaggagtggggtatcgcgtgccctat
ggaccggactccttcccagaccccatcccccgcaggcctgagtacccccagcctgactat
gacgactacacaccagcgggaggcagcaggtctggcttcagaagcagaacgcccagcacc
ttcagcgtcccagagagcccatacagacgaccctcaggatacattcctgagcggtactat
gacgaggacgactacggcccgcctgacgctcctccgagaccccatctccggaccctccca
gaccctcgttctgagcttgcctttggggcgcgaccccctccccccatccgagagggcctc
cctctgagtctggcccccctctcggacagtgacccctacagtgaggaggaggagaggcca
gaaccctggcgtgtgggaccccctttccctccgttccctgacagacaggggccaggtggt
ggtggtggcccacggagagtctatgagagacgatatgagccgtatgcaggcctgagcaca
gaggactgtgggatactgcacggctgtgagaacggcaggtgtatccgggtggcggaggga
tacacgtgtgactgctacgagggctacgagctggacatgacctccatggcctgcatagac
atcaatgaatgtgtgaatcctgacaacgcgtgtgcgaacggccgatgcgtcgacacagac
ggctcctatcgctgtgtgtgccaccggggctacgtcatgtcccgccggcccaaccactgt
gtggcagcataa
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