Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385691
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Entry
139385691 CDS
T10872
Name
(RefSeq) chordin-like
KO
K04657
chordin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139385691
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
Motif
Other DBs
NCBI-GeneID:
139385691
NCBI-ProteinID:
XP_070987063
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Position
27:28051918..28085106
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AA seq
953 aa
AA seq
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MLPLSSMQTRGALSSLMCVMSCALLHSGLASRLKSPILPIQSEREPLTSKGMSGCSFGGR
FYSLEDTWHPDLGEPFGVMHCVKCYCETQRGRKGKVLGKVSCKNVKRDCPEPSCDAPVLL
PGQCCKTCPKGDVDRKQVEAMFDGFEYFQEKEKEDDLHKTYNDRSYLSSEDISPGESRTD
FVAVLTGVTDSWLPSSSGVARARFSLTRTSLTFSITYQRIGRPSRVVFLDSDGNTAFEYK
TPKGDSDMICGVWKNLPQSHVRQLQAEQLRVTMTTATGRREVIEGKIIKHRALFAETFSS
TLTSEEEHSGMGGIAMLTLSDTENNLHFVLILQGLIQHRERDSTLVPIQVRLQYRQHVLR
EIHANVTVYDTDFAEVLTDLNSRELFWLSRGQLVITVETEVQDPRHISGFITGRKSCDTI
QSVMSSGDALTPGKTGGVGSAFFHLHDNGTLDYQVHLVGVSSEVMGLTIELKPRRRSKRS
VLYDLTPEFDRPSGRAAGSWSRVEARHIHMLLQNELFINVATAHSQEGELRGQIKGLLYS
GLEAPRHDIPVPLAGQFVAPPVLTSAGGHAWVSVDERCHLHYEIVVAGLSKAEDLTVNAH
LHGLAEIGELDERSTNHKRLLTGFYGSQAQGVLKDISVELLRHLDRGTAFIQVSTKVNTR
GEIRGRVHVPNNCEFRTKGEVELAEFDDLFVRDPEELKKDPHTCFFETQHHAHGSLWTPN
YNHCFTCSCQKRTVICDPVICPVLTCSRTIQPDDKCCPMCVERKNPKEMKTPERLDEHPE
GCYFEGDQKMHAPGSTWHPFVPPFGYIKCALCTCKGATGEVHCEKVTCPALTCSRPVRRS
PSDCCKECPEEDNPPLEHADMMQADGTSHCKFGKNFYQNSDNWHPRVPLMGEMKCITCWC
DHGVTKCQRKQCPVLTCSNITRREGMCCPECQDSKEEEEEPMKVPEKKNSWRH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctctccagtatgcagactcgcggagcgctgagttccttgatgtgcgtgatg
agttgcgcgttgctgcactctggactggcctcacggcttaagtctcccattctgcccatc
cagtcggagagggagcctttaacatccaagggcatgtcaggatgttcattcggaggaaga
ttttattcgctggaggacacttggcaccctgacctcggggagccgtttggggtcatgcac
tgtgtcaaatgttactgtgagacacaaaggggtcgtaagggtaaggtgttgggaaaggtg
agctgtaagaacgtcaagcgggactgtcctgagcctagctgtgatgccccagtgctgcta
cctggacaatgctgcaagacctgccccaaaggcgatgtggacaggaagcaagtggaggca
atgtttgatggcttcgagtacttccaggagaaggagaaagaggatgacctgcacaagacc
tacaatgaccgctcatacctcagctctgaggacatttcccccggggagagccgtactgac
tttgtagcagtgttgacgggagtgacagactcctggttacccagctccagtggtgtggcc
cgggcacgcttctctctcactagaaccagcctgaccttctccatcacctaccagaggatc
gggagaccaagcagggttgtcttccttgattctgatggaaacactgcatttgagtacaag
acccctaagggagactcagacatgatctgtggagtgtggaagaatcttccccaatcccac
gtgcgacagctacaggcagaacaacttcgggttactatgacaacagccaccggtagacgg
gaggtgatcgaaggaaagatcatcaaacacagagcactgtttgcagagacgttcagctcc
actctgacctcagaagaggagcattctgggatgggaggcatcgccatgctgactctgagt
gacacagagaataaccttcactttgttctcatactgcagggactgatacaacatagagag
agagactccaccctggttcccatccaggtacgactgcagtaccgccaacacgtcctgaga
gagatccatgccaacgtcaccgtctatgacacagactttgctgaggtgctgacagacctg
aacagtcgggagctcttctggttgtcaaggggccagctggtgatcaccgtggaaactgag
gtccaggacccccgacacatctctggctttatcactggcaggaagtcatgtgacaccatc
caaagtgtcatgtccagtggtgatgcattgacaccagggaagacaggcggtgtgggatca
gcattctttcatctccatgacaacggcaccctggactaccaggtccatctagtgggggta
tccagtgaggtgatgggtttgaccatcgagctaaagcctcggcggcgcagtaagcgctcc
gtgctgtatgacctaactccagagttcgacaggcccagcgggcgggcggctggcagctgg
agtcgcgtagaggctcgtcacattcacatgctgctgcagaatgaactgttcatcaacgtg
gctaccgcacacagccaggagggggagctacgcggacagatcaaaggcctgctctacagc
ggcctggaggcacccagacacgatattcctgtccctctggcaggccagtttgtggctcct
ccggtcctgactagtgctgggggccatgcctgggtgtctgtggatgagcgctgtcacctc
cattatgagatcgtggtggcaggcctaagcaaagctgaagacctcacagtcaacgcccac
ctccacggattggctgaaatcggagaacttgacgaacgcagcaccaatcacaagagactg
ctgacagggttctacggttctcaggcccagggtgtgttgaaggacatcagtgtagagttg
ttgcgtcacctggacagagggacagccttcatccaggtcagcaccaaggtcaacaccaga
ggagagatacgcggacgggttcatgtgcctaataactgtgagtttcggacaaagggtgag
gtggagttggcggagtttgatgacctgtttgtgcgtgatcctgaggaactaaagaaagac
ccccacacctgtttcttcgagactcaacaccacgcccacggctcactctggacccccaac
tacaaccactgtttcacctgcagctgtcagaagcgcacagtgatctgtgacccggtcatc
tgtccagtcctcacctgctctcgcaccatccagcctgacgataagtgctgccccatgtgt
gttgagaggaaaaaccccaaggaaatgaagactccagagaggctagacgagcatccagaa
ggttgttactttgagggggaccagaagatgcatgctcctgggtctacctggcatccattc
gtccctccgtttggctacatcaagtgtgccctctgcacctgcaagggagccacaggcgag
gtgcactgtgagaaggtgacgtgtccagccctgacctgcagtcgtccggtacgccgtagc
ccctcagactgttgtaaggaatgtccggaggaagacaacccccccctggagcacgctgac
atgatgcaggcagacgggacgagtcactgcaagtttgggaagaacttctaccagaacagt
gacaactggcacccccgtgtgcccctgatgggagagatgaagtgcatcacctgctggtgt
gaccatggtgtgactaagtgtcagaggaaacagtgtccagtcctgacctgtagtaacatc
acccgccgggagggcatgtgctgtcctgagtgccaagattccaaagaggaagaggaggag
ccaatgaaagttccggaaaagaagaacagctggagacactga
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