Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385709
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Entry
139385709 CDS
T10872
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein-like isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
139385709
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GFIT
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NCBI-GeneID:
139385709
NCBI-ProteinID:
XP_070987085
LinkDB
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Position
27:complement(51724247..51786280)
Genome browser
AA seq
1967 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGLDTHLDTDDLLDGSSDPSSSFFSGAGCHIPEVLPP
VQLLSNEQPVLPRVSVDLDFLEDDVILGGSPGGGGSNTMEPCDILQQSLAEANITEQSLQ
EAEAELDLGSFDLTMPGLTQVVQTLPCTDSLTGSGGTAVGVGLPIFPEAPGSSATPPQAT
ADLLGSVLAQQGLEFGPQVMNKAQTISMQPFIQQVAGLGNVTLQPIAPLQALPNGCQSGH
LGLGQIQVMGQPTVMTMNQSGQPILAKSMGGYQLHQPGPEAQGVGGQGGLGGGLLIQGGK
ATLGSPVLNGPALGTNINGSTITAAGSLGQQGQNLIIQRTPTPIQPKPPQGGAAIQPKLF
KQQQAQPHTLQNDANKALGAQVPVSAAQNVAFLTGKPGANVVLTSQAGLPQQALYKQQTA
HHPSGKALSVHLLNQPGSIMLGGQNHQFLLPQQLAGGQILTQHPGGHIITSCGPGGQLIA
NQILAQHQNINLGQVLTSQGHPLLQGHIQLQPGQMGVGHQLFQMPVTLSQSQNHPVTGHQ
AHTVIQGMPLHNSLAMLSQVEGLSPAVSLQPALQPQPGGVPSSGVGGAAAIAQGQPGGSS
ADQAAHPGQAPQPSSILSMQAGPSVSMAMSVPSSSPSLSVSTTLVPHLAQQHSPGSRVLF
TGHQGSSMILSQEHLQMFLQQDQRQTENDPVPTVSVGVPASVIVSSNSSFGHASSGHDSQ
LAETAVVNQMPQAGVQQQQLKLQSLSPSQPLASHTALPLSDSPQPSPLPMHSPQSWPPSQ
PQTPARSCTPSSLPPMFIIQNQIPGHSQPALQQQQQQIHLQPRPPSQPAPQQQQIHLQPR
PPSQPGLYEPDVPPPSRSPKPPQIPQAPLAGLQFTASQVGDPGGGVLKTQILTADRQHRL
QLVGAQPSPQQKHQVQQNILLQAKWQQQSQPQPQQHGGQQQDVPAPQSSVLVKTPATAFN
DVLSGAQVTQGGVAPANQPGQQSLHQAVQVGGVESVSGLSQMTSTQTFSPGLASLQTQTA
AMKMPFSMAKPSKEARMLEQLRKQQGSVLHPDYSSSFQCFEDTLTGLVPYHLYQGTATPP
HDYHRVDDEFERVSSQLLKRTQAMLDKYRHLLFEESTRLGPSAEMVMMDRMFIQEEKISL
GQDRILARDRPEEYVANSRMMEIESGAANMAQSKPQLQSQLHHKPQLQPQPHHKPQPHPE
PQPLSHPQPLSHPQPLSQPHPQLHSEPQLQSEPHPQPLSQLHPEPLSQLHPEPLSQPHPE
PQPHPQPLSQPHPEPQPHPQPLSQPQPQWFEPSPVRSGVAPASAPTPIPDHFPSTKLVIK
QGGAGASVFWSSSPAPVARPGSGVRHTADTQSHSSSFSRAPPPPSRHSPHRPFSSFRPAE
DDDTLPRRTSKPPMKTYAARPRIGLKLKIKQEAGFSKVVHNTALDPVHTPSTPNPKPQPL
PTTLPHPAPPLPTTLPHPAPALPTTLPHPAPALPTTRPQPTPALPTPRPQPAPALPTTRP
QPAPALPTTRPQPTPALPTTLPHPAPALPTTLPHPAPALPTTLPHPAPALPTTRPQPTPA
LPTTLPQPTPALPTTRPQPTPALPTTRPQPTPALPTTRPQPAPALPKAQTAALATPPSIT
VIRTPPPSCNTASSAMVSIATTQANPSPQRVTAPASSSTAQMNGALEHHNVGGVKRNPAS
TATSPQTTCRLPLRKTYRENISPRVRPGVPGGGGDSVPYPRPSPSPPNSPSSPSPSSEGT
VITSMKLEKRGGSPREGGSHTELSREALRLGNSSPSSPGLVQGITNTQQHLSDREEERGR
EGDHWDRGADMGRYKRVSSKNHQRSGGGGGGDTFRMDQHAPGPPSSPPDTSCYRDSSLPA
KRCKSDSPVMDNASFSSGSPPHDESLNEHLQCAIDTILNLQGQAQGPTPRRAKGGSIRPH
HHHSQRPAAPQPSSHTYRPSVSSSSSSSLAHHSQVGGRGLVPQTHSR
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaagatggcaggtgcctgctagatgtcatttgtgacccagaagcactcaac
gattttcttcatggattagacacccatctggacactgacgacctattggatggctcgagc
gatccctccagctctttcttctcgggtgctgggtgccacattccagaggtcctgccccca
gtccagctgctgtccaatgagcagccagtcttgccccgtgtcagtgtggacctggacttc
ctggaagatgatgtcatcctgggcgggtcgccgggcggtggcggtagcaacaccatggag
ccatgtgacatcctgcagcagagcctggcggaggctaacattacagagcagagcctgcag
gaggccgaggcagagctggacctgggctccttcgacctcaccatgccaggtctgactcag
gtggtccagaccctgccctgtacagacagcctgactgggtctggagggaccgctgtgggg
gtggggctccccatcttccctgaagctccaggctcctccgccacccctccccaggccaca
gctgacttgctgggctcggtgctggcccaacagggcctggagtttgggccccaggtcatg
aacaaggcccagaccatcagtatgcagcctttcattcagcaggtggcaggcctgggtaac
gtcacccttcagccaatcgcccccctccaggctctacctaacggctgtcagtcaggacac
ctgggactgggacagatacaggtgatgggccagcccactgtgatgactatgaaccaatca
ggacagcccatcctggccaagagtatgggaggataccagctgcaccagcctggccccgag
gcacagggggtaggtgggcagggcggactgggagggggacttctgatccaagggggcaaa
gctactctgggatctccagttttaaacggcccggcgttgggcactaacattaacggtagc
accataactgctgctggaagcttgggtcaacaggggcagaacctgatcatccagcgaacc
ccgacccccatccagcccaaacccccccaggggggcgcagccatccagcccaaactgttc
aagcagcagcaggcccagccccacaccctccagaatgatgccaacaaggctcttggggct
caggtccctgtctccgctgcccagaatgtagccttcctgacaggcaagcctggcgccaat
gtggtcctgacctcccaggcagggcttccccaacaggctctgtacaaacaacagacagcc
caccacccctctgggaaagcactcagtgtccacctgctcaaccagcctggcagcatcatg
ctgggggggcagaaccaccagttcctcctgccacagcagctagctgggggtcagatcctc
acgcagcaccctgggggccacatcatcacctcctgcgggcctgggggccagctgatagcc
aaccagatcctggctcaacaccagaacatcaacctgggccaggtgctgacttctcagggc
caccctctgctccagggccacatccagctgcagccgggccagatgggggtgggacatcag
ctcttccagatgcctgtcaccctctcccagagccagaaccacccagtcacgggccaccag
gcccacacagtgatccagggcatgcccttgcacaactccctggccatgctgagccaggta
gaagggttgagtcctgctgtcagcctgcagcccgctctgcagccacagccagggggcgtt
cccagcagcggggtgggtggggctgctgccattgcacagggccagcctggggggagttct
gcagaccaggcagcccaccctggacaagcccctcagccctcctccatcctctctatgcag
gctgggccctctgtctccatggccatgtctgtcccctcctcctctccgtccttatctgtg
tccaccacactggtcccccacctagcccagcagcacagccccgggagcagggtgctcttc
acgggccaccagggctccagcatgatcctcagccaggaacacctccagatgttcctccag
caggaccagcgacagacagagaatgatcccgtccccactgtgtcagtgggcgtgccagcg
tccgttatcgtcagcagcaacagcagttttggccatgcctcctcgggccatgacagccaa
ttagctgagacagcagtggtaaaccagatgccccaggcgggtgtccagcagcagcaactg
aagctccagagcctatccccctcccagcccctggcctcccacactgccctccctctgtcg
gacagcccccagccctcccccctccccatgcattccccccagtcctggcccccttctcaa
ccccagacccccgcccgatcctgcaccccctcctctcttcccccaatgttcattatccag
aaccagataccaggccactcccagcctgcactacaacaacaacaacaacagatacacctc
cagccccggcccccctcccagcctgccccacaacaacaacagatacacctccagccccgg
cccccctcccagcctggtctctacgaaccggacgtcccccctccctctcgctcccccaaa
cccccccagatcccccaggcccctctggcagggctccagttcactgctagccaggtgggg
gaccccgggggtggggtgttgaagacccagatcttaacagcagatcggcagcaccgcctg
cagctggttggtgctcagccctctccacaacagaaacaccaggtgcaacaaaatattcta
ctacaggccaaatggcagcagcaaagccagccccaaccccaacagcatggtggtcaacaa
caagacgtgcctgctcctcagtcatctgtgctggtcaagactcctgccacagcattcaat
gacgtgttgtcaggagctcaggtgacccaggggggcgtggctccagctaaccagcctggt
caacagtcactacaccaggctgtgcaggtggggggggtggagtccgtgtcaggtctgagt
cagatgacctctacacagactttcagccctggtctggcctctctacaaacacagactgct
gctatgaagatgcctttcagtatggctaaacccagcaaggaagccaggatgttggagcag
ctgaggaagcagcagggctcagtcctccacccagactacagctcttccttccagtgcttt
gaagacaccctgaccggcctggtgccttaccacctctaccagggcactgccaccccacca
cacgactaccacagagtggatgatgagtttgagagggtttccagccagctcctgaagaga
acgcaggctatgctggataaatacagacacctcctttttgaggaatcaacgcgccttggc
ccgtcagctgagatggtaatgatggacaggatgtttattcaggaagagaagatctctctg
ggacaggaccgcatcctcgccagagacaggcctgaggagtatgtggccaactcaaggatg
atggagattgagagtggagctgccaacatggcccagtccaagcctcagctacagtcccag
ctccaccataagcctcagctacagcctcagccccaccataagcctcagccccatcctgag
cctcagcccctgtcccatcctcagcccctgtcccatcctcagcccctgtcccagccccat
cctcagctccattccgagccccagctccagtccgagcctcatcctcagcccctgtcccag
ctccatcctgaacccctgtcccagctccatcctgaacccctgtcccagccccatcctgaa
ccccagcctcatcctcagcccctgtcccagccccatcctgaaccccagccccatcctcag
cccctgtcccagcctcagccccagtggtttgagcccagccccgtaaggagtggtgttgcc
cctgcttcagccccaacaccgatcccagaccacttcccctccaccaagctggtgataaag
cagggaggagcgggtgcgtctgtcttctggtccagctccccagctcctgtggccaggccg
gggtcaggggttagacatacagccgacacccagagtcacagctcctccttcagccgcgct
cctccacctccctcccgtcactcaccccaccgccctttctcttcctttcgtccagctgag
gatgatgatactctcccccggaggaccagtaaaccccccatgaagacgtacgccgcccgc
ccacgcatcggcttgaagctcaagatcaagcaggaggcggggtttagtaaggtggtgcat
aacaccgccctcgacccggtccacacaccatccacacccaaccctaagccacagccactc
cctaccaccctgccccacccggcgccgccactccctaccaccctgccccacccggcgccg
gcactccctaccactctgccgcacccggcgccggcactccctaccacacgaccccaaccg
acgccggcactccctaccccacgaccccaaccggcgccggcactccctaccacacgaccc
caaccggcgccggcactccctaccacacgaccccaaccgacgccggcactccctaccacc
ctgccccacccggcgccggcactccctaccaccctgccccacccggcgccggcactccct
accaccctgccccacccggcgccggcactccctaccactcgaccccaaccgacgccggca
ctccctaccaccctgccccaaccgacgccggcactccctaccacacgaccccaaccgacg
ccggcactccctaccacacgaccccaaccgacgccggcactccctaccacacgacctcaa
ccggcgccggcactccctaaagcccaaacagcagcactagccacgccgccttctataact
gtcattaggactcctccccctagctgtaacacagcctcctcagcaatggtctccatagca
accacacaggcgaaccccagcccacagagagtcacagcgcccgcatcctcctccacggct
cagatgaacggagctttagaacatcacaatgtgggtggagtcaagcgtaaccccgcctcc
acggccacttcccctcagaccacctgccgcctgcctctacggaagacttaccgggagaac
atcagcccccgcgtccgaccgggtgtaccgggaggaggaggagacagtgtcccgtacccc
cgtccctccccctcgccccccaattctccctcctcaccctctccctcctcagaggggaca
gtgatcaccagcatgaagctggagaagagaggaggcagccccagggaggggggctcccac
acagagctcagccgggaggccctgaggctggggaactcctctccctcctctcctggccta
gtgcagggcatcacaaacacccagcagcatctctcagacagagaggaggagagggggaga
gaaggggatcattgggacagaggggcagacatggggaggtataagagggtgagcagtaaa
aaccaccagaggtctggtggcggcggtgggggtgatacgttcagaatggaccagcatgcc
cctgggcccccttcctcgccgccagacacttcttgttacagagactcatcacttcctgct
aagcgctgtaagtcagactctcctgtcatggacaacgcctccttctcctccggctccccg
ccacacgatgagtctcttaacgagcacctgcagtgtgccatcgacaccatcctcaacttg
cagggccaggcccaggggcccacaccgcgcagagccaaagggggctccatcaggccacac
caccaccacagccagcgacccgcggccccccagccctcctcacatacatacagaccctca
gtctcttcttcatcttcatcctctctggcccatcactctcaggttggaggcagaggactg
gtgccacagactcacagcagataa
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