Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385843
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Entry
139385843 CDS
T10872
Name
(RefSeq) extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139385843
G protein-coupled receptors [BR:
ocla04030
]
Others
Chemoreception
Vomeronasal pheromone
139385843
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
DUF2919
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
139385843
NCBI-ProteinID:
XP_070987201
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Position
27:39952392..39956685
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AA seq
869 aa
AA seq
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MSLCGWLWLLYCLHVPGSVWGLDGGGEGACQLEAKPVSGSVYRAGDVVIGGLFPIHVEAP
LPEQEFRSIKGNSTCTMFNQRAYRWLQTMIFAVEEINRDPALLPNLNLGFLASDTCRSEG
TTLGAALAMVTGKEASVVGKECGTTPEVPVIIGDARSSASMVVAQTLGPFDLPMVSYFAT
CACLSDNWRYPSFFRTVPSDAFQARGMAKLLRQLGWVWVGLVSEDGDYGKFGVQVLLQEL
QGSGVCVAYSEVLPKLPSKRKIRHIADTIRGSTARVVVAFVGFAGHSGALMEEVVRQNIT
DKQWIASEAWVTFSTIAAPKNLPSLAGTIGFALKKAEIPGLGPFLTRLHPDGDYQKSDPF
LRELWEEMFGCSLGVEPSVTLPSRRQCTGSEVIREGESQYADVSQLRASYNVYKAVYAIA
YAIQDMMACRPGDGVFNGGQCPDIRKLQPSQIVHYLRGVNFSTPVGESFHFDMNGDPPAS
YDIINWHVTPEGTAEFVQVGHFLSSEGLDDQFHIDMDKVVWGGGSGDEVPVSVCSADCPP
GTRHAVQKGRPVCCFDCLSCAEGEISNTTGSVECIKCPERFWSNPDRTACIPQLVDFLSY
SDTMGVILSVISVSGATLTAGTLATFLYHRHTALVKANNSELSFLLLLSLKLCFLCALVF
IGRPKPWTCMLRHTLFGISFVFCISCLLSRTVVVLVAFRATLPGENLMRYFSPTQQRMGI
SLCTLIQVLICVLWLALAPPRPAERRGRERRGPKVVLECEVGSVVGFSLVLGYIGLLASL
CLLLAFLARKLPDNFNEAKFITFSMLIFCAVWISFIPAYVSSPGKYTVAVEIFAILASSF
GLLFCLFAPKCFIILLRPERNTKKHMMSK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtgtggctggctgtggctgctctactgtctccatgtccctgggtctgtctgg
ggtctggatggcggtggagagggggcttgtcagctggaagctaagcccgtctcgggcagt
gtttaccgggcaggagatgtggtcattgggggcctgttccccatccatgtggaagcccct
ctaccagaacaggagttcaggagcattaagggaaattctacctgtacaatgttcaaccag
cgtgcttaccgctggctccagactatgatctttgctgtggaggagattaaccgtgaccca
gccctcctgcctaacctcaacctggggttcctggcatctgacacatgccggtcagagggc
accaccctgggggcagccctagccatggtgaccggcaaggaggcctccgtggtgggcaaa
gagtgtggcacaactcctgaggttcccgtcatcatcggggatgcccgttcctcagcttcc
atggtcgtggcacagaccctcgggccgtttgatttacccatggtgagttactttgccact
tgtgcatgcttgagtgacaactggaggtacccctcattcttccgtacggtacccagcgat
gcctttcaggctcggggcatggccaagctgctgcgtcagctgggctgggtgtgggtggga
ctggtgtcagaggatggtgactatggcaagtttggggttcaggtgcttctccaagagctc
cagggatctggggtgtgtgtcgcctactctgaggtcctccccaagttaccatcaaagaga
aagatcaggcacattgcagacaccatcagaggatctactgccagagtggtggtggcattt
gttggattcgcgggtcattcaggggccctgatggaagaggttgtccgtcagaacattaca
gataagcagtggattgcctcagaagcctgggtcactttctctactatcgccgccccaaaa
aacctgccctctcttgctgggacaatcggttttgccctgaagaaagctgaaattcccggc
ttggggcctttcctaacacgcctccatccagacggggactaccagaagtccgaccccttc
ctgagggaattgtgggaagagatgtttgggtgttctctgggggttgaacccagcgtgaca
ctgccgtccaggagacagtgtactgggtcagaggtcatacgtgagggggagagccagtat
gctgacgtgtctcagctgagagccagctacaatgtgtacaaggctgtgtacgccatcgcc
tacgccatacaggatatgatggcctgtcgaccaggggatggagtctttaacggtggacag
tgccctgatatcaggaagcttcagcccagccagattgttcattatctgaggggagtgaac
ttcagtactcctgtaggggaatctttccacttcgacatgaatggtgatccgcctgcctct
tatgacatcatcaactggcatgtgacccccgaggggacggcagagtttgtccaggtcgga
cattttctgtcctctgagggattggacgaccagtttcacatcgacatggataaagtggtg
tggggtgggggcagcggagatgaggtccctgtgtctgtatgcagtgctgactgtccccct
ggtaccaggcatgcggtacagaaggggaggcctgtgtgctgctttgactgtctgtcctgt
gctgagggagagatcagcaacacaacagggtcagttgagtgtattaagtgtccagagcgg
ttctggtccaaccctgatcgtacggcctgcatcccccagctggtggacttcctctcctat
agcgacaccatgggcgtcatcctgtctgtcatctcagtttccggggcaacactcacagcc
ggtaccctggccaccttcctctaccaccgtcacacggccctggtgaaagccaacaactct
gagctcagcttcctgctcctgctgtcactcaagctctgcttcctgtgtgcgctggttttc
attggccggccgaagccgtggacatgcatgctgagacacaccctgtttggtataagcttt
gtgttctgcatctcctgtctgctcagcaggactgtggtggtgctggtggccttcagggcc
actctgcctggagagaacctgatgagatacttcagccccacccagcagaggatgggtatc
tcactctgcacactcatccaggtgctgatctgtgtgctgtggctggccttagctccaccc
cgacctgctgagaggaggggcagagagcgtcggggcccgaaggtcgtcctggagtgtgaa
gtgggctctgtggtcggcttctctctggtgctgggctacatcggccttctggcctccctc
tgtctcctcttagccttcctggccaggaaactcccagacaacttcaacgaggccaagttc
atcaccttcagcatgttgatcttctgtgccgtgtggatctccttcatccctgcctacgtc
agctctcctgggaagtacacagtagctgtagagatctttgccatcctggcctccagcttt
gggctgctgttctgtctgtttgctccaaaatgtttcatcatcctcctgagaccagagaga
aacaccaagaaacacatgatgtccaaatag
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