KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385858
Entry
139385858         CDS       T10872                                 
Name
(RefSeq) cell adhesion molecule 1-like
  KO
K06781  cell adhesion molecule 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    139385858
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocla04515]
    139385858
Cell adhesion molecules [BR:ocla04515]
 Immunoglobulin superfamily
  Nectin family
   139385858
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig C2-set_2 V-set C1-set C2-set_3 KOW2_Spt5 Syndecan
Other DBs
NCBI-GeneID: 139385858
NCBI-ProteinID: XP_070987230
LinkDB
Position
27:21936340..22093073
AA seq 421 aa
MAITGNGSLTISLSVFVISAAFLLKGAAETLSVEGQNLGTDNVSVIEGEMATISCRVKNN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGSPIMDSQEDVVSEGNETELTCTAMGSKPAASIRWMKGEQELTGK
MTVDETYDGMFTVTSRLRLTVSKEDDGAPVSCIIDHPAVKDLRAQRYLEVLYQPEVKIVQ
AFPEGLTREGENLELTCIAKGKPQPHQISWLRVDDDVPSHTVITGSDLFIENLNKSYNGT
YRCVASNAVGEAYDDYILFVYDAPTTIPAPTTLNLDNTQDSRAGDGAPQKIDHAVIGGVV
AVVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTEEKKEYY
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgatcacgggaaacggatctctcactatttctctctctgttttcgtgatttcagca
gcgtttcttctaaaaggagccgctgagaccttgtcagttgaaggtcaaaacctggggact
gataatgtatcagtgattgagggggagatggcgaccatcagctgcagggtgaagaacaat
gatgactcagtcatccagctcctcaaccccaacaggcagaccatctacttcagagacgtc
agacccctgaaggacagccggttccagctggtgaatttctccgacaacgagctgcgggtg
tctctgtccaacgtgtcactgtcagatgagggacgctatgtgtgccagctctacacagac
cctcctcaggaggcctacgcagacatcactgtgctggtcccaccaggcagtccaatcatg
gattcccaagaggatgtggtcagtgaggggaacgagacagagctcacctgtacagccatg
ggcagcaagcctgccgcctccatcagatggatgaaaggagagcaggagctgacaggcaag
atgacggtggatgagacctacgacgggatgttcacagtcaccagtaggctgagactcacc
gtgtccaaggaggatgacggagcgccagtcagctgcatcatcgaccacccagccgtgaag
gacctccgggcacagagatatctggaagtgctatatcaaccagaagtgaagattgttcag
gcattccctgaaggtttaacaagagagggagagaatctagagctgacgtgcatagcaaaa
ggcaaaccacagccccatcagatcagctggctcagagtggatgatgatgtgccgtctcac
accgtgatcaccggctctgacctcttcatcgaaaacctcaacaagtcgtacaacggcacg
taccgctgtgtggcctccaacgccgtgggagaggcctacgatgactacatcctctttgta
tacgatgctcctaccacgatccccgcacccaccaccttgaacctagacaacacccaagac
tccagagctggcgatggggcgccacagaagatagaccacgctgtcatcggaggcgtggtt
gccgtggtgatgttcgctatcctctgtgcactcatcgtcctggggcgctacttcgccaga
cacaaaggcacctacttcacacatgaagccaaaggggcagacgacgcagcagatgcagac
acggccatcattaatgcagaggggggacacaacaacacggaagagaagaaggagtactac
atctaa

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