Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385889
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Entry
139385889 CDS
T10872
Name
(RefSeq) IQCJ-SCHIP1 readthrough transcript protein-like
KO
K24832
IQ domain-containing protein J
K24833
schwannomin-interacting protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139385889
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
IQ domain-containing proteins
139385889
Others
139385889
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Gene cluster
GFIT
Motif
Pfam:
SCHIP-1_C
IQCJ-SCHIP1
IQ
IQ_SCN5A_C
FEZ
Motif
Other DBs
NCBI-GeneID:
139385889
NCBI-ProteinID:
XP_070987275
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All DBs
Position
27:14692946..15048559
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AA seq
740 aa
AA seq
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MLRTGNYRNMYQGEGTRLRGGSLGGAREGKRLALCISQEEEKRHHRFCNHGGGQQVHKME
RNVYLRSEEEDDNSPGCLEHQRYWETKAIVIQRAWRATLYRRESWQGDCENRTHHQCGTE
SLESYQTAVMDEFGQDLSLEELKSLQTGLKHVNDESVQLQSHQLTTDLENNFNMPPMKIK
VLIIQRAWRDFLQRQELMEKRSPSPPSLSSSDKMSTSISMTTLSDGITPDYREDGMDLGS
DASSRSSSESNSNKVTPCSPSLDLACLEDYKSSPSLELATLDDYKSSPSLELATLEGDYK
SSPSLDLATLEDEDYEEDEDYQEYKKKVIEEWKSEYGDDYSSQQPHGQEEGGVVGGIGAP
GGGYRKPVNSRSLAEEFQDVKPPPLPAHSGHTATFAAAVPEELKQNGNLILPHSPTRPLP
RGTGATKPSHRRSSRGRGGIGGGGGGGGGIGGRMGGYREEEIVEEESLPTMDWAALERHL
AGLQSREQENQNLNHNHSLGKTAYTSAQKNERESIRQKLALGSFFDDGPGIYTSCSKSGK
PSLSSRLQSGMNLQICFVNDSGSDKDSDADDSKTETSLDTPLSPMSKQSSSYSDRDTTEE
DSESLEDMDFLSRQKKLQAEAKLALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPHISE
CLMKRSLKPTDLRDMTLGQLQVIVNDLHSQIESLNEELVQLLLIRDELHMEQDAMLVDIE
DLTRHAESQQKHMAEKTPSK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggaccggcaattatcggaacatgtatcaaggagaaggcacgaggctgcgtggc
gggagtctcggcggcgcgcgggaagggaaacgtcttgctctgtgcatcagccaggaggaa
gagaagaggcaccatcgcttctgcaaccatggtggaggacaacaagtgcataagatggag
agaaatgtttacctgaggagtgaggaagaggatgacaacagtcctggttgccttgagcat
cagcgctactgggagaccaaggccattgtaattcagcgtgcctggcgtgccaccctttac
cgcagagagagctggcagggggactgtgagaaccgtacacatcatcagtgtgggacggag
tcgctggagtcctaccagacggctgtgatggatgagtttggccaggacctctctctggag
gaactgaagagcctccagactggcctgaagcatgtcaatgatgaaagtgttcagctgcag
agtcaccagctgactacagaccttgagaacaacttcaacatgcccccaatgaagatcaag
gtgttgattatccagcgcgcttggcgtgacttcctccagagacaggaattgatggagaag
aggagcccctcccctccctccctctcctcctctgacaagatgagcacgtccatcagcatg
accactctatcagatggcatcacccctgactaccgggaggatggcatggacttggggagc
gacgcctccagtcgctccagctccgagtccaactccaacaaggtgacaccctgttctccc
tccttagacctggcatgcctggaggactacaagtcctccccatccctggaactggcaacc
ctagatgactacaaatcctccccatctttggaactggcaaccctagaaggggactacaaa
tcctctccctccctggatctggcaaccctggaggatgaggactatgaggaggatgaggac
taccaggagtacaagaaaaaggtgatcgaggagtggaagagcgagtacggggacgactac
agctcccagcagccccatggccaggaggagggtggagttgtgggggggataggggcacct
ggcggaggctacaggaagccagtgaacagccgcagcctggccgaggagttccaggatgtg
aagcctccacctcttcctgctcacagtggacacacagccaccttcgctgctgccgtgcct
gaggaactgaaacagaatggcaacctgatcctgccccactcccctaccaggcccctaccc
aggggcacgggggccaccaaacccagccacaggcgctccagccggggaagaggtggcatt
ggaggagggggtggtggaggagggggaataggaggacggatggggggatacagagaggag
gagattgtggaggaagagtccctgcccaccatggactgggcagctctggagagacacctg
gcggggctgcagagcagagagcaggagaaccagaacctcaatcacaaccacagcctggga
aagaccgcctacacctcagcccaaaagaatgagagggagtccatccggcagaagctggcc
ctgggtagtttctttgacgatgggccgggtatctataccagctgcagcaagagtggcaag
cccagtctgtcctcacggctgcagagtgggatgaacctgcagatctgttttgtcaacgac
agcggcagtgacaaggacagcgatgcagacgacagcaagacagagaccagtctggacaca
ccgctgtcccccatgtcgaagcagagttcgtcctactctgaccgggacactacggaggaa
gacagtgagtctctggaggacatggactttctgagcagacagaagaagttgcaggccgag
gctaagctagccctggcgatggccaaacccatggccaagatgcaggtggaggtggaaaaa
cagaaccgcaagaagtcccctgtggcagacctgctgccccacatgccccacatcagtgag
tgcctgatgaagaggagcctgaagcctacagacctgagagacatgaccctgggacaacta
caggttatagtcaacgacctgcactcccagatagagagcctgaatgaggagctggtgcag
ctgctgctgatcagggatgaactgcacatggagcaggatgccatgctggtggacatagag
gacctgaccaggcatgctgagagccagcagaaacacatggctgagaagaccccatccaaa
tga
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