Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385893
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Entry
139385893 CDS
T10872
Name
(RefSeq) tsukushi-like isoform X1
KO
K08130
tsukushi
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139385893
Proteoglycans [BR:
ocla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
139385893
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_LRWD1
LRR_EndoS
LRR_RPS2
LRR_9
LRR_NXF1-5
LRRNT
LRR_SKP2
Motif
Other DBs
NCBI-GeneID:
139385893
NCBI-ProteinID:
XP_070987286
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All DBs
Position
27:complement(25329277..25339076)
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AA seq
395 aa
AA seq
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MVKVFKPWNDGGQIIFLISQKNCVPLIGTTRMSLTVSEKSAGCKSTMSFPLCVSLWMLLA
VHCQAGAVKNCHPSCHCEVESFGLFDSFSLTRVDCRGVGTSPIPIPLDTAHLDLSSNSIS
LLTDTMLSGPGYTTLVSLDLSNNRISMVSPKALSRLRYLESLDLSHNSLEGLDEGCFSGL
PLAEVDLSHNHFREFDLDMFITKGHGEPINVDLSHNQLTVVSRSSSRSPLLHVQSLTLAA
NQLRAVPKLKGIPLRDLSLDGNSISHVEEGAFEDLKDLVHLSLSGLPELFDIQPNSFRGL
QNLQVLDLSNNAKLKALSPAVFSGLVSLQELNLSNSGVTSLPNNMLSHLPSIKSITLGQN
IHCWRAQKQGQFHRQLGQEQKHDEVLTCDVKGIVS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaggttttcaagccttggaacgacggaggtcagatcatatttctgatttctcag
aaaaactgcgttcctctgataggtaccacacggatgagtttgacggtctcagaaaagtcg
gcaggctgcaagagcacgatgtcgttccccctgtgtgttagtctgtggatgctcctggct
gttcactgccaagctggagctgtgaagaactgccacccaagctgccactgtgaggtggag
agctttggcttgttcgacagcttcagcctgaccagggtggattgcaggggagtgggcacc
agtcccatccccatccccctggacactgcccacctggacttgtcctccaactccatatcc
ctgctgaccgacactatgctctctggacctggctataccaccttggtcagcctggacctc
agcaacaatcgcatatccatggtcagccccaaggccctgtccaggctgcgctacctggag
tctctggacctcagccacaactccctggagggcctggatgagggctgcttctctggcctc
cctctggctgaggttgatctcagccacaaccacttccgggagtttgacctcgacatgttc
atcactaaaggtcatggagagccaatcaacgtggatctgtcccacaaccagctgacggtg
gtctccaggagttcctctaggagccccttgctacatgtccagagcctgactctagcagcc
aatcagctgagggccgtgcctaagctcaaaggcatcccgttgagggacctaagcttggat
gggaacagtatctcgcacgttgaggagggggcctttgaggaccttaaggacctggttcac
ctatccctcagtgggcttcctgagctctttgacatccagcctaacagtttcagaggcctt
cagaaccttcaggtcttggacctgtccaacaacgccaagctaaaagcactgagtccagct
gtgttcagtggacttgtgtctctacaggagctcaatctgtccaactctggagtaacgtca
ttgccaaataacatgctaagtcacttgccaagcatcaagagtattaccctgggccagaat
atccattgttggagggctcaaaagcagggccagtttcacaggcagcttggacaggaacag
aaacatgacgaggtgctaacctgtgacgttaaaggcattgtgtcgtga
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