Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385929
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Entry
139385929 CDS
T10872
Name
(RefSeq) 5'-3' exonuclease PLD3-like isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00564
Glycerophospholipid metabolism
ocla00565
Ether lipid metabolism
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
139385929
00565 Ether lipid metabolism
139385929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139385929
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
139385929
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
139385929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
139385929
NCBI-ProteinID:
XP_070987327
LinkDB
All DBs
Position
27:complement(8171849..8184289)
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AA seq
485 aa
AA seq
DB search
MISDIPYEKMCNVESRREESCRKAQMYYRCLLGLTGVVSLLLAAVFLQTLLLPVVNSSPN
KPGFQLPLPLTDTCTDPCKIVLLESIPEGLEFNSSVTNPSIYQAWLNLISEARSSVDIAS
FYWTLTNKDTGSHEPTADQGEDVLNRLAQVSGKLSVRIAVNTPTESQHHEDLILLQSSGA
DVRAVNMRNLTTGVLHTKFWVVDKKHIYIGSANMDWRSLTQVKELGAVVYNCSCLAADLG
KIFEAYWYLGQKDTPIPSPWPSSFNTPYNKDSPLQLPLNGTASHVYLTSSPPSFCAAGRT
GDLQSILSVMEDAQEFIYIAVMNYLPTMEFSRPKRYWAEIDTQIRRVAYEKRLKVRLLIS
CWASTSPVMIPFLKALDSMQKPKAKLDVQVKLFVVPANPKQKEIPFARVNHNKYMVTDKV
AYIGTSNWSGDYFVNTAGSALVVNQTAAQSVEPTVQAQLQAVFERDWDSGYSTPIHQHTN
LKMVC
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgatattccctacgagaagatgtgcaatgtggagtcgaggagagaagagtcc
tgcaggaaagcacagatgtattataggtgtctgctgggtctcactggggtggtcagtctg
ctattggctgccgtgttcctccagaccctgctgcttcccgtggttaactcctccccaaac
aagcccggcttccagctcccacttcctctcactgacacctgcaccgacccctgcaaaatc
gttctattggagagcatcccagaggggttagagttcaattctagtgtcaccaacccatcc
atctaccaggcttggctaaacctgattagtgaggctcgcagtagcgtggacattgcgtct
ttctattggacgctcaccaacaaagacacaggctctcatgagccaacggcggatcagggc
gaggatgtactgaataggctagctcaggtgtctgggaagctctctgtccgcatcgctgta
aatacaccaacagagtcccaacatcacgaagacctcattctattacaaagttctggtgct
gatgtaagagccgtgaacatgcggaatttgaccactggagtacttcacaccaagttctgg
gtggtggacaagaagcacatctacattggcagtgccaacatggactggaggtcccttacc
caggtgaaggagctgggggctgtggtgtacaactgcagctgcttggctgcagacctgggg
aagatcttcgaggcctactggtaccttgggcaaaaagacacacccatcccgtccccttgg
cccagcagtttcaacactccttacaataaggactcgcccctgcagttaccactcaacggc
acagcctcccacgtgtatctgacgagttctccaccatctttctgtgctgctgggaggacc
ggagacctgcagtctattctcagtgtgatggaggacgcacaggagtttatctacatcgct
gtcatgaactacctgcccaccatggagttctcgcgacccaaacggtactgggcagaaatt
gacactcagatcagacgtgtggcatacgagaagcggctgaaggtgcgtctgctcatcagc
tgttgggccagcacttcgcctgtcatgatccccttcctgaaagccttggattcaatgcag
aaacccaaggccaagctggatgtccaggtgaaactctttgttgtgccagccaatcccaag
cagaaagaaatcccctttgccagggtcaaccataacaagtacatggtgacggacaaggtc
gcctacataggtacctctaactggtctggagactattttgtgaacactgctggatcggct
ctggtggtgaaccaaacggctgcccagtcagtagagcctacggtccaggcacaactacag
gccgtgttcgaaagggactgggactccggctacagcaccccaatccaccagcacaccaac
ctcaaaatggtgtgttag
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