Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385950
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Entry
139385950 CDS
T10872
Name
(RefSeq) importin subunit alpha-3-like isoform X1
KO
K23583
importin subunit alpha-4/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139385950
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139385950
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Gene cluster
GFIT
Motif
Pfam:
Arm
Arm_3
ARM_ARMC5
HEAT_EZ
HEAT_2
HEAT
IBB
HEAT_MROH2B_C
Adaptin_N
TOR1L1_N
HEAT_GCN1
V-ATPase_H_C
Cnd1
TPR_TRIP12_N
ARM_PUB
Arm_2
TPR_DNAAF5
CTNNBL
TPR_LAA1_C
Mo25
Motif
Other DBs
NCBI-GeneID:
139385950
NCBI-ProteinID:
XP_070987360
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Position
27:complement(15214235..15227006)
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AA seq
549 aa
AA seq
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MSDNEKLDNQRLKNFKNKGRDLETMRRQRTEVVVELRKNKRDEHLLKRRNVPHEDTCEDS
DADGDFRSQNTSLEAIVQVSALPILKHFLDMDLLPRYVIPCVLLLQNATSDNQGVQLSAV
QAARKLLSSDRNPPIDDLIKSGILPILVHCLDRDDNPSLQFEAAWALTNIASGTSEQTQA
VVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSI
PITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDA
GNEQIQMVIDSGIVPNLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALGHFP
SLLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAI
SNLTISGRKDQVAYLIQQQVIPPFCNLLTVKDAQVVQVVLDGLSNILKMADDEAETIANL
IEECGGLEKVEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDSSLVPEAIQGGTYGFNSST
NVPTEGFQF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacgagaaactagacaaccagcgactgaagaatttcaagaacaagggtcgc
gacttggagacgatgagaagacagaggacagaggtggtggtggaactccgcaagaacaaa
agggacgaacacctgctgaagaggcgaaacgtgccccacgaggacacctgcgaagactct
gatgccgacggagacttcagatcgcaaaacacctctcttgaagcaatagtacaagtaagt
gcacttccaattttgaaacatttcttagacatggatttgcttccacggtatgtgattccc
tgtgtgctgttgttgcagaatgccacaagtgataaccagggagttcagctgagtgccgtg
caggctgcaaggaagctgttgtctagtgaccgtaaccctcccatagatgacctgatcaag
tcaggcattctccccattctggtgcactgtctggacagagatgacaatccatctctacag
tttgaagctgcctgggctttgaccaacattgcatcaggaacctcagagcagacccaggca
gtggtccagtccaatgctgtgccactgttcctgaggctgctgcactctcctcaccagaat
gtgtgtgagcaggcggtctgggccctgggaaacatcataggcgacggcccccagtgcagg
gactatgtgatcagtctgggcgtggtgaagcccctgctctccttcatcagcccctctatc
cccatcaccttcctccgtaacgtcacctgggtcatggtcaacctctgccgccacaaggac
ccaccgccacccatggagaccatccaggagattcttccagctctctgtgtgctgatccac
cacactgatgttaatatcctggtggacacggtgtgggctctgtcctacctgacagacgcg
ggcaacgagcagattcagatggtcatcgactcaggcattgtgcccaacctggtgcccctg
cttagccaccaggaggtcaaagtccagactgctgctctgcgggcggtgggcaacatagtg
actggaacagatgaacagacccaggtagtgctcaactgtgacgccctgggacacttcccc
tctctccttacacaccccaaggagaagatcaataaggaggcagtgtggttcctgtccaac
atcacagcaggcaaccagcagcaggtgcaggctgtcattgatgccaacctggtacccatg
atcatccaccttctggacaagggagattttggaacacagaaagaagcagcctgggccatc
agcaatctgacaattagcgggaggaaggaccaggtggcgtacctgatccagcagcaggtg
atccctcccttctgtaacctgctgacagtgaaggatgctcaggtggtgcaggtggtcctg
gacggcctcagcaacatcctcaagatggctgacgacgaggccgagaccatcgccaacctc
atcgaggagtgtggaggtctggagaaggtggagcagctccagaatcatgagaatgaagac
atctataaactggcctatgaaattattgatcagttcttctcatctgatgatattgatgaa
gactccagcctggttccggaggcgatccaggggggaacatacggcttcaattcctccacc
aacgtgccaacagaggggttccagttctag
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