Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385954
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Entry
139385954 CDS
T10872
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139385954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139385954
03032 DNA replication proteins [BR:
ocla03032
]
139385954
Spliceosome [BR:
ocla03041
]
Complex A
U1 snRNP components
Sm proteins
139385954
U2 snRNP components
139385954
Complex B
U1 snRNP components
139385954
U4/U6.U5 tri-snRNP components
139385954
Complex C
U2 snRNP components
139385954
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
139385954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
139385954
NCBI-ProteinID:
XP_070987369
LinkDB
All DBs
Position
27:complement(23459022..23460369)
Genome browser
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLVNCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttaaataaacctaagtctgagatgactcctgaggagctccagaagcgggag
gaggaggagttcaatactgggcccctgtctgtgctcacccagtctgtcaaaaacaacaca
caggtcctcgtcaactgccgaaacaacaagaagctgcttggccgtgtcaaggcatttgac
agacactgcaacatggtcctggagaatgtgaaggagatgtggacagaagttcccaagagt
ggcaagggcaagaagaagtccaaaccagtaaacaaggaccgttacatctctaagatgttc
ctgagaggagactctgtaattgtggtgctgagaaaccccctcatcacaggaaaatag
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