Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385972
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Entry
139385972 CDS
T10872
Name
(RefSeq) LIM domain kinase 1-like isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139385972
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139385972
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
139385972
Protein kinases [BR:
ocla01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
139385972
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
RIO1
Kdo
PDZ_6
PDZ_2
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
139385972
NCBI-ProteinID:
XP_070987389
LinkDB
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Position
27:complement(18616579..18706156)
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AA seq
664 aa
AA seq
DB search
MRLMLLCCDWKDERMGEEEAGRSLPVCAGCRQRIYDEQYLQALNTDWHTVCFRCCECSAS
LSHWYYEKEGRLFCKKDYWAKFGELCHGCNDPITTGLIMVAGEQKYHPECFTCLNCRAFI
GDGDTYALVERSKLYCGLCYYQTIVTPVSLPDSPCARIPHTVTLVSIPASTDGRRGISVA
INQPVSPNGYGPERTVRVSQVDSELISPDVKNSIHVGDRILEINGTPIRNVPLDEIDLLI
QETSRLLQLTIEHDPHDQGGLEGETVGGPLTTPLSDGPSPILPITQPPHPDINNLRSRMI
TRSYSIDKSPCSSNAASPLSQRKDFNRSESLRVVSNSRMHRIFRPSDLIHGEVLGKGCFG
QAIKVTHRETGEVMVMKELIRFDDETQRTFLKEVKVMRCLDHPNVLKFIGVLYKDKRLNF
IAEYIKGGTLRETIKKMDTNYPWNQRVSFAKDIAAGMSYLHSVNIIHRDLNSYNCLVREN
NSVVVADFGLARLMVEDKIQDKSLLQKKPDRRKRYTVVGNPYWMAPEMIHGKSYDEKVDI
FSFGIMLCEIIGRVNADPDYLPRAHDFGLNVTGFLEHFCPPDCPPAFFPMAALCCDLDAE
KRPAFTKLEGWLENLKMHLEIRLPVVSELDTLHKTFWGNHTAPTMACTAMRSENGLPPHP
ETPE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgttgtgactggaaggacgaacgtatgggagaggaggaagct
ggcagaagcttgcccgtgtgtgctggatgcagacagcggatctatgatgaacagtatctc
caggcactcaacactgactggcacacagtttgcttcagatgctgtgagtgcagtgcctcc
ctgtcccactggtactatgagaaggagggccggctcttctgcaagaaggattactgggcc
aagttcggagagctgtgccatggatgcaatgaccccatcaccaccggactgattatggtc
gcaggggaacagaagtaccacccagaatgcttcacctgtctgaactgcagagccttcatc
ggagacggagacacctacgcactggtggagaggtccaaactatactgtggcctctgttac
taccagactatcgtgacgccggtgtccctgccagactcaccatgcgccaggattccccac
acggtgaccctggtgtccatcccagcctccacagacgggcggagagggatctcagtcgcc
atcaaccagcctgtcagccccaacggctacggccctgaacgcactgtcagggtatcacag
gtggactctgagttgatcagtccagatgtgaagaactccatacatgtcggagaccggatc
ctggagatcaacggaacacccatcaggaatgttcctctcgatgagattgacctgctcatc
caggagaccagtcgtctgctccagctgaccatagagcacgacccccacgaccaggggggt
ttagagggtgagacagtgggcggacccctgaccacccccctgtctgacggtccaagcccc
atcctccccatcactcagcccccacacccagatatcaacaacctgcgctcacgaatgata
acgcggagctacagtattgataagtctccgtgctccagtaacgcagcgtcccctctctct
cagaggaaggactttaaccgctccgagtcactgcgagtcgtctccaacagtcgaatgcac
cggatcttccggccttcagacctcatccatggagaggtgctcggaaaaggctgctttgga
caggccatcaaggtgacccacagagagacaggggaggtgatggtgatgaaggagctgatt
cgttttgatgacgagacacagaggacattcctaaaagaggtgaaggtgatgcgttgtctg
gatcaccccaacgtgctgaagttcatcggtgtcctttacaaagataagagactcaacttc
atcgcagagtacatcaaaggaggaaccctgagggagacaatcaagaaaatggacaccaac
tacccatggaatcagagagtgagctttgctaaagacatcgctgcaggaatgtcatatctg
cattccgtgaacataatccaccgcgacctgaactcatacaactgtcttgtcagagagaat
aacagtgtggtggtggcagactttgggctggctcggctgatggtggaagacaagatccag
gacaagagtctcctgcagaagaaacctgaccgcaggaagagatacacggtagtgggcaac
ccctactggatggccccggagatgatccacgggaaaagctatgatgaaaaagtggacatc
ttttcctttgggatcatgctttgtgagatcatcggtagggtgaatgcagacccagactac
ttgcccagggcccatgactttgggctgaatgtgacaggcttcttagagcacttctgtcct
ccagactgtcccccagccttcttccctatggctgccctctgctgcgacctggatgctgag
aaacgccccgccttcaccaagctggaggggtggctggagaacctgaagatgcacctggag
atccgcctgccggtggtgtccgagctcgacacgctacacaaaacgttttggggaaaccac
accgcccccaccatggcttgcaccgccatgcggtccgagaacggcctgcccccacacccc
gagactccggagtaa
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