Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385973
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Entry
139385973 CDS
T10872
Name
(RefSeq) F-box only protein 39-like
KO
K10314
F-box protein 39
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139385973
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139385973
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Pes-10
DUF4746
RsgA_GTPase
F-box_5
KIND
Motif
Other DBs
NCBI-GeneID:
139385973
NCBI-ProteinID:
XP_070987391
LinkDB
All DBs
Position
27:complement(9414009..9417766)
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AA seq
489 aa
AA seq
DB search
MNYPEDPEEQLSEDENEEEEEGEDEGIEIMDEEEEEEEGEVEENEEPKLGWANLPDVCLR
QVFWWLRDRDRVKAALVCLHWHHVMRSPSLWRVRTFNFSGRISRTRRSELETAVCYAKTY
GAYLEDLEIRFSHPLNSLVSRRFQQTLRTFLAALRKTRGGLRRLTVNHMELDRAAWCRSV
RKALVRSLTFYLRRESSRLGYLSLRGARLNLPQGLEVLEAVAASQQHIHLGRRPGITHLN
LEDFFSQPLAVFISPAFPQVMNRFQGLCTLTLNYSCLSDELLAALSAACRSLDGGGSLQT
FTIRCHIHEPHIQVVWGDAWSHLAQRCPDLRVHITVERILNMDKLGRILLREIPLRSLSL
TSCYFSEQDWSVKPALTNLVPYYRSCLQKLTLDLNNSHESVDEELLEVVLLCSQLVYMKV
WAFLDISFLDRLLQKRLENKIILRTIKVRIYINKYDTQDEDEQLEEVYSRYRQLINSELH
YFAISYPML
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccccgaggatccagaggaacagctctcggaggatgaaaatgaagaagaagag
gagggggaggatgaaggaatagagataatggatgaggaggaggaggaggaagaaggcgag
gtggaggaaaatgaggagcctaaactgggctgggctaacctcccggacgtgtgtctgcgg
caggtgttctggtggctgcgtgaccgtgaccgtgtcaaggcggccctggtgtgtctccac
tggcaccacgtcatgcgctcgccctctctctggagggttcgaaccttcaacttctccggc
cgcatctccaggacccgccgctcggagctggagacggccgtgtgttacgccaagacctac
ggcgcttacctggaggatctggagatccgcttctcccaccccctcaactctctggtgtcc
cggcgcttccagcagacgctgaggaccttcctcgccgcgctgcgtaaaaccagaggcgga
ctacgccgcctaactgtcaaccacatggagctggaccgcgccgcctggtgccgcagcgta
cgcaaggcgctggtgcgcagcctcaccttctacctgcgccgcgagagctcccgcctgggc
tacttgagcctgcgaggggcccgcctcaacctgccccagggcctggaggtgctggaggcc
gtggctgcatctcagcagcacatccacctgggccgccggcccggcatcacccacctcaac
ctggaggacttcttctcacagccgctggccgtcttcatcagccccgccttcccccaggtc
atgaaccgcttccagggcctctgcaccctgaccctcaactacagctgcctgtcggacgag
ctgctggcggccctgtccgcggcgtgtaggagcctggacgggggaggctccctgcagacg
ttcaccatacgatgccatatccacgagccccacatccaggtggtctggggggatgcctgg
tcccatctggctcagcgttgtcccgacctccgtgtgcatatcacagtggagcgaatcctc
aacatggacaagctggggaggattctgctcagagagatcccgctgcgctcgctcagtctc
accagttgctacttcagtgaacaggactggagtgtcaagcctgcccttaccaacctagtg
ccctactacaggagctgtttacagaaactgaccctggacctgaacaacagtcacgagtct
gtggacgaggagctgctggaggtggtgctgctgtgcagccagctggtctacatgaaggtc
tgggcattcctggacatcagcttcctggaccggctgctgcagaaacgcctggaaaataag
atcatcctaaggaccatcaaggtgcggatctacatcaacaaatatgatactcaggacgag
gatgagcagctggaggaggtgtactctcgctacagacaactcatcaactcagagctccac
tactttgccatctcctaccccatgctctga
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