Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386125
Help
Entry
139386125 CDS
T10872
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139386125
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
139386125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
YgbB
Motif
Other DBs
NCBI-GeneID:
139386125
NCBI-ProteinID:
XP_070987656
LinkDB
All DBs
Position
27:41338163..41463950
Genome browser
AA seq
1377 aa
AA seq
DB search
MAANAGSMFQYWKRFDLQQLQRELDATATQLANRQDESEQSRKKLIDQSRDFKKNTPEDV
RKQVAPLLKSFQGEIDALSKRSKEAEGSFLNVYKRLIDVPDPVPVLELGQQLQLKLQRMH
DIETENLKLRETLEDYNKEFAEVKNQEVTIKALKEKIRDYEQSLKNQAENLVQEKQVQLH
NDYAEKERTLQESQNSMSSKLVEADHKAQALQTALETTQAELFDLKTKYDEDCTAKADEI
EMVMTDLERANQRAEAAQREAEALREQLTSSNQSLQLTTHIQPTPDTDQAVEALSLSSLE
AELGAKDREMVQLVDDVQRLQASLSKLRESSSTQITQLQLQLSTKTDTLKQLEEKLQEHA
DYEEVKKELSILKSMEFGPTDSSVQDMSKPLEVLLLEKNRSLQSESSSLRIANTELSGSA
GRKGKEASVEETTTPSTPSLPPPLLPPSPQPRTPTDPLNTSITNGTHPFTPTGIGQDFYS
PPFPLVGGKMSLNSLLQRQLMQTFYSKALQESTQGAALLFAPVHYTSTSTSGSGSSPVPL
SASPLQFPAGPEVNGSGGAPSPSPSQSEGTGGSVSDWEDMDTTEIARQIKEQLIKHNIGQ
RVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMRQFLSDEQNILALRSIQGRQR
ESPGQPLSHALQDVPMQRASSDQASRTGNITTRIRTPECGSDDAIKSILEQAKRELHVQK
SDFSLGPSPGGGLRGGGGGGGGSDEAIRSILEQARREMEAQQAAVEPSLKSSTSSSHSQR
DLLVSHLAASFPAYTPLALSLKNTPTALPVSPSSPSTVLDFSSSVKREDRGVSVPDSLAD
GVPRLGRSPEGSARPGGGHRRDQWWSNMNPDPRRDTPTLGGEENHTQEDSKEALSQGSMC
DGVGSRQNPWSKMTSRGLRMQLWLNGDLSQNTHIKPAHNQAEGQTSASCSPAPAEGTPSQ
TSASCSPAPAEGTPSQTSASCSPPPGSPLSSAEESLNGLGGDRDPLAPQAPSLEPPSGEP
SGGESQPGTPLPLPGPITGLSIQETIAMSPELDTYVLTKKVKEVLTDNNLGQRLFGESIL
GLTQGSVSDLLARPKPWHKLSLKGREPFVRMQFWLQDPHKVEKLMDMKRLEKKAYLKRRH
SSLSDGHSVDGGLAGPDFLQSASPQHQQPPQLYQKKIRVVLGPEEKEALKRAYQEKPYPS
PKTIEELASQLHLKTSTVINWFHNYRSRIRRELFIEEIQAAGSAAAAKAGEGDSCDGTES
DGTVEGRHRRPTGPEDHREAPEDQDMEVRVEAGVSGGSPVPRNCTTSGSAGPGSSSSSLF
GPPEAGLSLSAPASHTSTPARNPRENNLRKKKAANLNNIIHRLEKAAGKEDPSEWEF
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcaatgtttcaatattggaagcgttttgatttacaacaactg
cagagagaactagacgccaccgccacacagctcgccaacagacaggatgagagcgaacag
tccaggaagaaactcatcgaccagagccgcgacttcaagaagaacacaccggaggatgta
agaaaacaggtggctcccctgctcaagagtttccagggagagatcgatgccttgagcaaa
agaagtaaagaagcagaaggttccttcttgaacgtctacaagagattgatagatgttcca
gaccccgtccctgtgctggagttgggtcagcagttacagctgaagctccagcggatgcac
gacatcgagacagagaacctcaaactcagagagactctagaggactacaacaaagagttt
gccgaggtcaagaaccaggaggtgactattaaagcgctgaaggagaagatccgggactat
gagcagtccctgaagaaccaggctgagaacctggtccaggagaaacaggtccagctccac
aatgactatgcagagaaggagagaacgctccaggagagccagaactccatgtcctctaag
ctggttgaggctgatcacaaggcccaggccttacagacagctcttgaaacaactcaggca
gagctctttgatctgaaaaccaagtatgacgaggactgcaccgcgaaggccgatgagatt
gaaatggtgatgacagatctggagagagccaatcagagagccgaggcagcacagagggag
gcggaagctctgagggagcaactgacctcttctaaccaatccctgcagctgaccacccac
attcagcccaccccagacacggaccaggcggtggaggccctgtccctctccagtctggag
gcagagctgggggccaaggacagggagatggttcagctggtggatgatgttcagagactg
caggccagcctgtctaaactcagagagagttccagcacacagatcacacagctgcaacta
cagctcagcaccaagacggacaccctcaagcaactggaggaaaagctgcaggaacatgct
gactatgaagaggtgaagaaagagctgagcatcctcaagtctatggagtttggcccaact
gacagctcagtgcaggacatgtctaaacccctagaagtgttgttgttggagaagaaccgt
agtctgcagtctgagagttcctctctgcgcatcgccaacacagagctgagcgggtcagcc
gggcggaaagggaaagaggcgtccgtggaggagaccaccacgcccagtaccccctccctg
cctcctcctcttctccctccctccccccagccccgaaccccaactgacccccttaacacc
tcgatcaccaacgggacgcaccccttcacccccacgggcatcggccaggacttctacagc
ccccctttcccactggtggggggcaagatgtccctcaactccctcctgcagcgccagctc
atgcagacgttctactccaaagccctgcaggagtccactcagggagcagctctactgttc
gcccctgtccactacacctctacctccacctccggctctggctctagccctgtcccgctc
tcggccagccccctgcagtttcctgcaggcccagaggtgaatggtagtggcggtgccccg
tccccctctcccagccagtctgaggggactgggggcagtgtgtctgactgggaggacatg
gacaccacagagatcgcccggcagatcaaggagcaactgattaaacacaacattggccag
cgggtgtttggccactatgtactgggcctgtcccaaggctcggtcagtgagatcctggct
cggcccaaaccctggagcaagctgaccatccggggcaaagagcccttccacaagatgagg
cagttcctgtctgacgagcagaacatcctggcactacgcagcatccagggacggcagaga
gagagcccaggccagccccttagccacgcattacaggacgtaccgatgcagagagccagc
tctgaccaagcctcgcggacaggtaacatcaccacacgcatccgtaccccagagtgtggt
tcagacgacgccatcaagtctatcctggagcaggccaagagagagctgcatgtgcagaaa
tctgacttctcccttggtccttctcctggtggggggctgagaggaggaggaggaggaggc
ggtggttcggacgaggccatccgctccatcctagaacaagctcgaagagagatggaggcc
caacaggctgctgtggaacccagcctcaaatcctccacttcatcctctcactcccagagg
gacttactggtctcccatctggctgcctccttccctgcctacacccctctggctctctcc
ctgaagaacacccccaccgccctcccagtctccccctcctcgccctcaacagtcctggac
ttcagctccagtgtgaagagggaggacaggggagtgtcagtgccagacagcctggctgat
ggggtgcccaggctgggtcggagccctgaggggtctgcccggcctggaggggggcaccgg
agggatcagtggtggagcaacatgaacccagacccccgcagagatacacccacactgggg
ggagaggagaaccacacccaggaggactctaaagaggctctttcccagggaagtatgtgt
gacggcgtggggtctcggcagaacccttggagcaagatgacctccagaggcctgcgtatg
cagctgtggctgaacggtgacctgagccagaacacacacatcaagcctgctcacaaccaa
gcagagggccagacctcagccagctgcagccctgccccagcagagggcactcccagccag
acctcagccagctgcagccctgccccagcagagggcactcccagccagacctcagccagc
tgcagccctcctccagggtctccactgagctctgctgaggagtcactcaatggtttaggg
ggcgaccgggaccctctggccccccaggccccttctctggagcccccatctggtgagccc
tcagggggagagtcccagcccggtacgcccctgccactccctggccccatcacaggcctc
agcatccaggagacgatagccatgtctcctgagctggacacatacgtcctcaccaagaag
gtcaaggaggtgctgactgataacaaccttgggcagcgtctgtttggggagagtatcctg
ggtctgacccagggctcggtgtctgatctgctggctcgacctaagccctggcacaagctg
agtctgaagggacgtgagccattcgtccgcatgcagttctggctgcaggacccacacaaa
gtggagaaactaatggacatgaaacgcctggagaagaaggcctacctgaagaggcgccac
agttcgctgagtgatggccattctgtggacggtggcctggcagggccagacttcctccag
agcgccagcccccagcaccagcagcctcctcagctgtaccagaagaagatccgagtggtt
ctgggtcccgaggagaaggaggctctgaagagggcttaccaagagaaaccctacccctcc
cccaaaaccattgaggagctggcctcccagcttcacctgaagaccagcactgttatcaac
tggttccacaactacaggtctcgtatccgcagggagctcttcatagaggagattcaggct
gcagggtcagcggcagcagctaaagcaggggagggggacagctgtgacgggacagagtcc
gatggcacggtggagggtcgccaccggaggcctacagggccagaggatcacagagaggcc
cctgaagaccaggacatggaggtcagggttgaagctggggtgtcaggtggatcccctgtc
ccgagaaactgcactacctcaggttcggccgggccgggctccagcagcagcagcctcttc
ggtccccctgaggcaggtctctctctctcagccccagccagtcacacctcaaccccggct
aggaaccccagggaaaataacctgcgcaagaaaaaagctgccaacctcaacaatatcatc
cacagactggagaaggctgccggcaaggaagacccatctgagtgggagttctga
DBGET
integrated database retrieval system
