Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386133
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Entry
139386133 CDS
T10872
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04512
ECM-receptor interaction
Brite
Lectins [BR:
ocla04091
]
C-Type lectins
Lecticans
139386133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139386133
NCBI-ProteinID:
XP_070987667
LinkDB
All DBs
Position
27:16647201..16767842
Genome browser
AA seq
3128 aa
AA seq
DB search
MAWIIPPLLQRQGTGTGAVVLLSALIAVIVTEDSAAQVFDSYGLSYALRSELSEDAILVA
NNGIRVPFGRAVFIDPINDLVIQVQPGDRCSITVLDNDPLSQRPGQLSPKKFPCEFGPND
VKYSHFGSRSPPLDRVRLQLRYDTHTDTIIIPFMMEVEVIFTQLEVLTRNMPLTVDKLLG
TSNPIDSKILEFTYDRSEHQCKITSLSSGSALPRYGKLVDEGKLGKMVDCDKFIKMNTRY
QHTFAHKSPNRDYFPMIVELQDKEGNLLKQEFFQVMVRIKDGEENTAPKPSFVAMMMMEV
DQFVMTAITPDMLAAEDIESNPDNLIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLKE
LKIAYKPPSVDSETERIFQIEFEVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLY
EGQSRPLSSSHNLEVSDEDNLDDVKITVVDGLRHGQLTVLGSRRKFFAPADLDGGVVIYQ
HDGSDTYSDNIIFRMTDGKHEVEFLFPLTIVPTDDEPPIINANTGLILFKNQMMLISPLT
LSAADIDSEDSTIRFTIEAPFSPIGEVLLRQSEAPEDPSTWKFNAEDELYEKEVTEWLQQ
DITDGKLFYRHTGPHSTDTVMDQFVFRVQDDNDPPNQSEQSSFIIKILPVDDIPPELYPG
TTLQMTVHEYQLTYFRKKFLRYTDLDSEDRDLKYTVTQPPTDTDENSPVVLGSIVLTESP
DTVVTEFTQAQVNHHKISYNPPDLELGITAHVLQVQYTVEDTSGNTVIGTFSIFLQPVDN
KPPQITNTGFTIFERGTHKITRAELHTVDLDTDSSQISFTLTQPPQHGTVQYTFTDLTKG
DAFNLLDIANDRISYIHNGDESTSDFFQLDVSDGVHVVTITIRVIVKPIDDETPTISLPA
GTIGSYIDVLENGATEITTKVIQGRDEDTDDLRLTFILEDPPVFGEILVNGVQSGSFTQA
DVINGLVVYAHTSGEIGLTTKYDYFNLTLTDMSDEWTVGGNRVTGVRVQITILPMDSQAP
EVFIGPQFTVVEGEKNVIEIFHISADDIDTPNDDLLCTIIVQPTSGYVENISPAPGSEKS
RSGTAISAFTIKDIRQNHIYYVQSIHKRVEPVEDRFTFRCSDGINFSERHFFPIAIIPSN
DEKPEIYMREFVVMEGMNIVIDTPILNGADADIPSDELTFIITKPPKHGFILNQLTTGTV
TVTNFTLDQIREASSIVYEHDDSETKEDSFDLILTDGKYTVEKTIIVMIIPVDDETPRMA
INDGLEIEIGDVKVIDNNVLKATDLDSEDSTLTYVVRYGPGQGLLQRRTPYGTLENITVG
MNFTQYQVDQALIVYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVSGIDMVFPDVVSK
GVSLKEGGRVTLTTDLLSTSDLNSPDEHLVFTITRAPQRGHLECTDGPGMPISSFTQLQL
AGSKVYYIHTADDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTVHSLVVNEGE
NKLITPFELTAEDRDTADPLLKFTVTQVPVHGHLLFNNTRPVSSFTKQDLNENLISYKHD
GTESSKDSFSFIVTDGTHTDFYVFPDTVFETRRPQMMKITVLSVDNGVPQIVVNKGGPTL
RVLETGHLGFLITSKTLKAKDRDSLPLSVTFKITVGPEHGYLINLGTGNATVTTFTQAEV
DDMKICYVLRDGHNATSDIFFFSIEDNGGNRLKNQVFRLNWAWVSLEKEYYVLDEEAKYL
EVVLKRRGYLGETSFVSISTRDGTAEKDKDFRGKAQKQVQFNPGQTTATWRVRILQDGVY
EQSETFQIVLSEPVMAALEFPDTATVEILDPADESTVFIQSAVYSIEEDIGELLIPVRRS
GDVTQELMVICYTQQATATGTIPSTVLSYSDYISRPEEHNSVLRFDKGETESSCRVVIID
DSLYEEEESFNVTLSMPMGGRLRQEYHTARVTIIPDLDDAPVFYFGGTDYRVDESDGYVE
VKVYRTGTDLSKTATVTVRSRKTDPVSAEAGVDYVGISRNLDFAPGVSQQTFRVTILDDL
GQPVLEGTETFELILRMPMNGILGEPGKATILINDSVSDLPKVQFHDAMYMGHENSGQIS
VVVYRSGDISYRSTVRCYTRQGTAQVMMDFNERPNTDASIITFLPGEVEKPCVLSLVDDT
EHEEEEELRLVLGSPRSESPFGASIGKQNETLVKIKDEADKAIIKFGETKFSVSEPSGAG
QVSMVKIPVLRVGDTSKVSVVRVHTKDGSATSGEDYHPVSEDIEFKEGDTEHYIEVEILY
DGVREMREAFTVHLKPDENMVAETQMNKAIIYIEETNSMADVTFPSVPQVFSLLQYDDTS
RARNTPLVAGYPVVCVTACNPKYPDYDKTGSICISEHINDTLTRYRWLVSAPTSLDGVTS
SMREVDFDTFFSSSKIITLDSVYFQAGSRVQCAGRAVNSNGDEGLELSSSIVSISIENGM
CQPRVVGTVGAEPFSAKLRYTGAEDPDHPNLIKITVTMPHIDGMLPVVSTRPLSNFELTL
SPDGTRVGNHRCSNLLDFTEVKTRHGFITDATKNPEVIGETSPYQYSAPLRGSSILRFYR
NLNLEACLWEFTSYYDMSELLSDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGA
GGWQHFDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTE
ARFRGLFVISHSASSLSSMVMCADHPGVTFNLSLVRSEPTYNQPMQQWTFTSDFAVRDYS
GTYTVKLLPCTSPPSLEYSLPPVCNPREPVTFDLDIRFQQVSDPVAAEFSLNTQMLLLSK
RSLWLSDGSMGFGQESDTAFSQGDMIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVP
KYNPNNNEYGCLADAPSLLYRFKIIDKAQPETQARSFGNVGFRALLAVDDPQALALVRQP
GSDGFSMDSTALFQVSAGREWFIHTIYTVRSRENANRGIGKRSLEYHTLSQHSSPSLSQS
QSRSRRSANGLPDLTEDIGLDNNRGTNILHISLDLSRQRRTSPDREVLTRGVVPRELNHP
VESEDGLVLIIGILVGLLLTILIIIVIVLTVRSRQEKKKMEVPTATSCSTEPMITSGFTS
GGLDSSEV
NT seq
9387 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattattcctccgctgttgcaacgccaagggactggtactggcgctgttgtt
ttgctctctgctttgatcgcggtgattgtgacagaggactccgctgcgcaggttttcgac
agttatgggttatcatacgcgttgagatcggaactgtcagaggatgctatattggtggcc
aacaatggaatacgcgtgcctttcgggagagcagtgttcattgatcctatcaatgatctg
gtaattcaagtacaaccgggagacagatgtagtataacggttctggataacgacccgctc
tcccagaggccagggcagctctctcccaaaaagtttccctgtgaatttggtcccaatgac
gtaaagtattctcacttcgggtccaggagccccccgctggatagggtgaggctacagctc
agatatgacactcataccgacaccataatcatcccgtttatgatggaagtggaggtgatt
tttacacagttggaagtgttaaccagaaatatgcctctgactgttgacaaactgcttggt
actagtaaccccattgacagtaagattctggagttcacctatgatagaagtgaacatcag
tgtaaaataacgtctctctctagtggcagtgcattacccaggtatgggaaacttgtggat
gagggaaaacttggaaaaatggttgactgtgacaaatttattaaaatgaatacccgctat
cagcacacttttgcacacaaatcacccaatagagattatttcccaatgattgtggaatta
caagataaagagggtaatctgctgaagcaggagtttttccaggtgatggtgcgtataaag
gatggagaggagaacacggctcctaaacccagcttcgtggccatgatgatgatggaggtg
gatcagtttgtgatgacagccatcacccctgacatgctggctgctgaggacattgagtct
aaccctgacaaccttatcttcaacatcacctcccccctctccttcgaggaggggtacata
gtcagtacagatgaccggaacctgcccatcacctctttctaccagggagacctcaaagaa
ctaaagatagcctacaagcctccgtctgtggactctgagacagaacgtatcttccagata
gagtttgaggtggtggacactgagggggctgtgtctgatccgttcgccttcatgattgta
gtgaaacctatgaacacgcttgctccagtagtcaccaggaatacgggtcagcttctctac
gagggtcagtccagaccactgtccagctctcacaacctagaggtcagtgacgaggacaac
ctggatgatgtcaagatcacggtggtcgacgggctgcggcatggccagctgacagtgctc
gggtcacgcaggaagttcttcgccccagctgatctggacgggggcgtggtcatctaccag
cacgacggcagcgacacgtacagtgacaacattatcttccggatgacggatgggaagcac
gaggtggagttcctgtttcccctgacaatcgttcccacggatgatgagccgcccattatc
aatgccaacacggggttaatcctcttcaagaaccagatgatgctcatttcgccactcaca
ctcagcgctgcagacatcgactctgaggactccactatcaggttcaccatagaggcaccg
ttctcgcctataggggaggtgctgctgaggcagtcagaggccccagaggacccctccacc
tggaaattcaacgctgaggatgagctgtatgagaaagaggttacagagtggctgcagcag
gatatcacagatgggaaactgttctacagacacacagggcctcacagcactgacacagtc
atggaccagtttgtattccgggtccaggatgataatgacccccctaaccaatcagaacag
agctcgttcatcatcaagattctgcctgtggatgacatcccccctgagctgtatcctggt
accaccctccagatgaccgtacacgagtaccagctcacctacttccggaagaagtttctc
cgctacactgacctggactcggaggacagagatctgaagtacaccgtcacccagcccccg
acagacacagacgagaacagccctgtggtactgggctctattgtgttaacagagagtcca
gacactgtagtgactgagtttactcaggctcaggtcaaccaccataagatatcatacaac
ccacctgacctggagctggggatcacagcccacgttctgcaggtccagtacacggtggag
gatacgtcagggaatactgtcatcggaacgttctctatatttctgcagcctgtcgacaac
aagccgcctcagataaccaacactggcttcactatattcgagcggggaacacacaaaatc
accagagctgagctgcatactgtggacttagacacggacagtagccagatctccttcact
ctaactcagccccctcagcacggcacggtccagtacaccttcaccgacctgaccaaagga
gacgcgttcaacctgttggacatcgctaacgacaggatctcctacatccacaacggagac
gagtccaccagcgatttcttccagctggatgtcagtgacggcgtccatgttgtgaccatc
accataagggttatcgtgaagcccattgatgatgagaccccgaccatcagcctgccggcc
ggaaccatcggctcctacattgacgtcctggagaacggagccactgagatcacgactaaa
gtcatccagggacgggacgaggacacagacgacctccgtttgaccttcatcctggaggac
ccaccggttttcggggagattctggtgaacggggtccagtcaggaagcttcacccaggct
gatgtcatcaacggactggtggtgtacgcccacaccagcggagagatcggactcaccact
aaatacgactactttaatctgacgctgacagacatgtctgatgagtggacggtagggggc
aacagggtcacgggggtcagggttcagatcaccatcctccccatggacagccaggctcca
gaggtgtttataggcccacagttcactgtcgtagagggagagaagaatgtgatagagatt
tttcacattagcgctgatgatattgacactcctaatgatgacctgctttgtaccatcatt
gtccagcccacatcaggctacgtagagaacatctccccggccccaggttcagagaagtcc
aggtctgggactgcaatcagtgcattcaccatcaaggacatcagacaaaaccacatctac
tacgtccaaagcatccataaaagagtggagccggtagaggacaggttcacgttcagatgc
tctgacggcattaacttctccgagagacatttcttccccatcgctatcatcccgtccaac
gatgagaagccagagatctatatgagggagtttgtcgtcatggaagggatgaatattgtc
atcgatacgcccatcctgaacggagccgacgcggacatcccctcggacgaactcactttc
atcatcaccaaaccaccaaagcacggcttcatcctcaaccagctgacaaccggcaccgtc
acagtcaccaacttcaccctggaccagatcagggaagcctccagtatagtgtatgaacac
gatgactctgagaccaaggaggacagctttgacttaatcctgacggacggtaaatatacc
gtggagaagaccatcattgttatgatcatccctgtagatgacgagacacccaggatggcc
atcaacgacggtttggaaatagagataggagacgttaaagtgatcgataacaatgtttta
aaagccaccgacctggactcagaggatagtactctgacgtacgttgttcgctacgggccg
ggccaggggttgttacagaggagaaccccttacgggacgttagagaacatcacagtgggg
atgaacttcacccagtaccaggtggaccaggctctcatcgtctatatccacaatgggcag
gaaggaatccgggaccttatcaagtttgacgtgacggacgggatcaaccctctgatcgac
aggtacttctacgtgacggtgagcggcatcgacatggtgttccctgacgtggtcagtaag
ggggtctctctgaaagaaggcggtagagtaacgttgaccacagacctgctcagcaccagc
gacctcaacagtcccgacgaacacctggtgttcaccatcaccagagccccacagagaggc
catctggagtgtaccgacggccctggtatgcccatctcctcctttacccagctccagcta
gctgggagcaaggtgtactacatacacacggccgatgatgaggtgaagatggacagcttt
gagttcgaggtcacagacggttacaaccctgtgttccgcacgttccgtgtctccatcacc
gacgtggacaacaagaaaccggttctaacggttcacagccttgtggttaacgagggagag
aacaaactcatcacacccttcgagctgaccgcagaggaccgcgacacagctgaccccctc
ctgaagttcacagtcacccaggtccctgtccacggtcacctcctcttcaacaacacccgc
cccgtctcctccttcaccaaacaggacctgaacgagaacctcatcagctacaaacacgac
ggtactgagtcctccaaggattccttctcctttatcgtgactgacgggacgcacaccgac
ttctatgtgttcccagacaccgtgttcgagacgcgacgcccccagatgatgaagatcacg
gtcctgtcggtggataacggggtgccccagatcgtggtgaataaaggggggcccaccctg
agggtgttagagacgggtcacctggggttcctcatcacctctaagactcttaaggccaag
gacagggatagtcttccgctatctgtcacctttaagatcaccgtgggaccagaacatgga
tacctcatcaatctgggtacaggcaacgctaccgtcaccacattcactcaagctgaagtt
gatgacatgaagatttgctacgtgctaagggatggccacaatgctacgagcgacatcttc
tttttctccattgaggacaatggaggcaacaggctgaagaaccaggtgttcaggctgaac
tgggcctgggtctccctggagaaagagtactatgtgttggacgaggaggctaagtacctg
gaggtggtcctcaaacgacgaggatacctgggagagacatccttcgtcagcatcagcacc
agagatggtacggcggagaaggataaggacttccgtggtaaagcccagaagcaggtccag
tttaacccaggtcagaccacggccacatggagggtgaggatcctgcaggatggagtgtac
gagcagtctgagacctttcagattgttctgtcagaacctgtcatggctgccctggagttc
cctgacacagccactgtggagatcctcgacccagctgatgagtcgacagtgtttatccag
tctgcagtctactctatagaggaggacatcggggagctgctgatcccagtgcgcaggagt
ggtgacgtcacacaggaactcatggtcatctgctacacacagcaagccacagctacaggg
accatcccctctacagtcctgtcctactctgactacatatccagacctgaggaacacaac
agtgtcctgcgcttcgataagggcgagacagagagttcctgtcgtgtggtgatcatagat
gactctctgtatgaagaggaggagagcttcaacgttacccttagtatgcccatgggaggc
cgtctgagacaggagtaccacactgccagggtcaccatcatacctgacctggacgacgct
ccagtattctacttcggaggcacagactaccgtgtggatgagagtgatggttatgtggag
gtcaaggtgtataggacaggcactgacctctctaaaacagccacggtcactgtacgctcc
aggaaaacagaccctgtctctgctgaagccggtgtggactacgtcggtatcagcaggaac
ctggacttcgccccgggggtcagccagcagacattcagggttaccatcctggatgacctg
ggtcagccggtgctggaggggaccgagacattcgagctgatcctccgcatgcccatgaac
ggcatcctgggagaaccggggaaggccaccatcctcatcaacgactccgtctctgacctg
cccaaggtgcagttccatgatgccatgtacatggggcatgagaactccggtcagatctca
gtcgtggtgtatcgtagtggtgacatcagttacaggtcaacggtccgctgttacaccaga
cagggcaccgctcaggtcatgatggacttcaacgaacgacccaacacagacgcttccatc
atcaccttcctaccaggggaggtggagaagccgtgtgttctgtccttggttgatgacacg
gagcatgaggaggaggaggagctgaggctggtgttggggtcgccccgcagtgagtctccg
ttcggagcgtccatcgggaaacagaatgagactctggtcaagatcaaggacgaggcagac
aaggccatcatcaagtttggggagactaagttcagcgtgagtgagcctagtggggcaggt
caggtgtccatggtgaagatcccagtgctgagggtaggagacacctccaaggtgtctgtg
gtccgcgtccacaccaaggatggatcagccacctccggagaggactaccatcctgtatct
gaagacattgagttcaaggagggtgacacagagcactacatcgaggtggagatcttgtat
gatggagtcagagagatgagagaagcattcactgtccacctgaaacctgatgagaacatg
gtggctgagacgcagatgaataaggccattatctacatagaggagaccaacagcatggcg
gacgtcaccttcccctccgtcccccaggtgttctccttactgcagtatgacgacacctcc
agggccagaaatacccccttggtggcaggctaccccgtcgtctgtgtcacggcttgtaac
cctaagtaccctgactatgacaagactggctccatctgcatcagcgagcacatcaatgac
acgctgacacgctatcgatggttggtcagcgctccaaccagcctggacggggtcaccagc
tccatgagagaggtggactttgataccttcttctcctcctccaagatcatcaccttggac
tctgtctatttccaggctggctctagggtgcagtgtgcaggccgggctgtgaactctaac
ggagacgagggcctggaactcagcagctccatagtctccatcagtatagagaatggtatg
tgccagcctcgtgtggtgggtacagtgggcgctgagcccttctctgccaagctacgctac
accggagcagaggacccagaccaccccaacctcatcaagatcactgtcaccatgccacac
atagatggcatgctccctgtggtctccacccgtcctctgtctaactttgagctgacgttg
agtcctgatggtactcgtgtggggaaccaccgctgttctaacctgctggacttcaccgag
gtcaagacccgccacggcttcattacagacgccaccaagaaccctgaggtgatcggggag
acctctccctaccagtacagcgcccccctaaggggatccagcatactgcgcttctacagg
aacctcaacctagaggcttgtctatgggagttcactagttactatgacatgtctgagcta
ctgtcagactgtggagggaccatcggtacagacggacaggtgttgaacctggtccagtcc
tatgtgaccctccgggtgcccctccatgtctcctatgtgttccactccccggtgggggca
gggggctggcagcattttgacctgcagtctgagctacgactcaccttcgtatacgacact
gccatcttgtggcgggacggcatcggtagccctcctgaggctgagctacaaggagccctg
taccccaccagtatgcgtatcaacgaacagggtcgtctggtggtcaacttcagaacagag
gctcgattcagaggactgtttgtcatatcacactctgcgtcctctctgtcgtccatggtg
atgtgtgcggaccaccctggggtgacctttaacctcagcctggtgaggagcgagcccacc
tacaaccagcccatgcagcagtggacctttacatcagacttcgctgtgcgtgactactca
ggtacctacacagtgaagctgctgccctgtacctctccccccagtctggagtactccctg
cctcctgtctgtaaccccagagaacctgtcaccttcgacctggacatacgcttccagcag
gtgagtgacccggttgcggctgagttcagtctgaacactcagatgttgctgctgtctaaa
agatctctgtggctgtctgatggatccatgggcttcggacaggagagcgacaccgccttc
tcacaaggggatatgatctatggcagagtgatggtggatccagtccagaacctgggagat
tcctttatctgtaacatagagaaggtgttcctgtgcaccggcgcggatggatacgtgccc
aagtacaaccccaacaacaatgagtatggctgtctggctgatgctccctcgctgctctat
agattcaagatcatcgataaggcccagccagagacccaggccaggtcatttggtaacgtg
gggttcagggctctgctggctgtagacgaccctcaggccctggccctggtcagacagcct
ggatctgacggcttcagcatggactctacagcactgttccaggtgtcagcagggagagag
tggttcatccacaccatctacactgtccgctccagagagaatgccaacaggggcatcggg
aagagaagtctggagtaccacacactcagccagcacagcagcccgtccctgtcccagtcc
cagtctcgctccaggcggtcagcaaacgggttgccagacctaacagaggacatcggcctg
gacaacaaccgtggcaccaatattctccatatctccctggaccttagccgccagcgccgc
accagccctgaccgggaggtcctcactcggggtgtggtgcccagggagctgaaccatcct
gtggagagcgaggacggcctggtcttgatcatagggatcctggtgggcctcctcctcacc
atcctcatcatcattgtcatagtgctaaccgtacggtccagacaggaaaagaagaagatg
gaggttcccacggcaacgtcatgctccactgagcccatgataacatcagggttcactagc
ggtggcttggacagctcagaggtctga
DBGET
integrated database retrieval system
