Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386168
Help
Entry
139386168 CDS
T10872
Name
(RefSeq) RNA-binding protein FUS-like
KO
K13098
RNA-binding protein FUS
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139386168
09122 Translation
03015 mRNA surveillance pathway
139386168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139386168
Spliceosome [BR:
ocla03041
]
Complex A
Other components
Complex A specific factors
139386168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
139386168
NCBI-ProteinID:
XP_070987729
LinkDB
All DBs
Position
27:2349170..2371643
Genome browser
AA seq
436 aa
AA seq
DB search
MASDSGYGQPGAQSYGSYPPAQQSGPGYSQGNGSGSYGGQSYAGYGQSAEGYGQTQAASY
GQPAYDVYGQQGSDSAAGGADKSSYSQPSSYGGTVGGGSYGQSQGGYKGRSEGEGGQGRR
YGGDDGSSDRGSSDGYRGRGRGGYERGGYDRGGRGGPPSGMGGGDRGGYKNFGGPRDYGS
RDEPTGGSGGSQGSGSGGEQDNSDNNTIFVQGLGEDVTSDEVGNYFKQIGIIKLNKKTGL
PMINLYSDKATGRLKGEATVSFDDPPSAKAAIEWFDGKEFQGKPLKVSFATRRAEFTQRG
GGAGGGRGGGGGFGGRGRGRGFGGGGGGGGGGGGGGPNFDIKGGDWPCPNSSCGNMNFAR
RYECNKCGTPKPGDSGGDRGGGRGGYGGDRGGGYRGRGGFRGGDRGGYGGGGYGGDRGYK
MGGRGDHREDRRDRPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattcgggctacggtcagcctggcgctcaaagctatggatcttatcctcca
gctcagcagagtgggccgggctacagtcaaggaaatggaagtggctcatatggtggacag
agttatgctggctatggacagtctgctgagggttatggtcaaacacaggcagcaagctat
ggccagccggcctatgatgtctatgggcaacaaggttcggattccgctgctggtggtgct
gacaagtcgtcatacagtcagccaagttcgtatggcggcaccgttggtggcggctcttat
ggacaatctcaaggaggctacaaaggtcgaagtgaaggtgaaggcggtcagggcaggagg
tatggtggagatgatgggagctcagacaggggctcttctgacgggtatagaggccgaggg
cgtggtgggtacgagcgcgggggatacgacaggggtggaagaggcggccctccatccggt
atgggaggtggtgaccgtggtggctacaaaaatttcggtggtcctcgagactacggctca
agggatgaaccaactggaggtagcggtggtagccaaggtagcggcagcggtggggagcag
gacaactctgacaacaacaccatctttgtccagggactgggagaagatgtcacaagtgat
gaagtgggcaactacttcaaacagattgggattattaagttgaacaagaagactggcctg
cccatgatcaacctgtactctgacaaggctactggaagactgaaaggagaggccacggtc
tcatttgatgatccaccttccgccaaagcagccattgagtggtttgacggcaaagaattc
caagggaaacccctcaaagtgtcttttgccacccgaagagctgagttcacgcagaggggt
ggtggtgcaggaggaggaagaggtggcggaggaggttttggaggccgtggtcgtggacgt
gggtttggaggaggaggaggtggtggtggtggtggtggtggtggtggacccaactttgac
attaagggaggggactggccatgtcctaacagttcttgtggcaacatgaactttgcgcga
cgatacgaatgcaacaagtgtggcacaccgaaaccaggggacagcggaggagatcgtggt
ggcggcagaggagggtatggtggtgacaggggcggcggctacagaggccgtgggggattc
cgtggaggtgaccgcggtggttatggcggaggtggatatggtggtgacaggggctacaag
atgggaggaagaggtgaccatagagaagacagaagagatcggccatactaa
DBGET
integrated database retrieval system
