Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386181
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Entry
139386181 CDS
T10872
Name
(RefSeq) platelet-derived growth factor D-like
KO
K05450
platelet derived growth factor C/D
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
ocla04510
Focal adhesion
ocla04540
Gap junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139386181
04020 Calcium signaling pathway
139386181
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139386181
04540 Gap junction
139386181
09142 Cell motility
04810 Regulation of actin cytoskeleton
139386181
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139386181
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139386181
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Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
139386181
NCBI-ProteinID:
XP_070987754
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Position
27:34468273..34526872
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AA seq
367 aa
AA seq
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MNSSGRVALALLLALLVGFTRGTQGQVVSGKVVRSSNVRQHDLYRKEEVVTVTATGGVIQ
SPRFPNAYPRNLQLSWKLLSPHNTRITLEFDSHFALEEPENEVCRYDFVEVEDISETSTI
VWGRWCGQRVPPRLTSKTNTLKVSFKSDDYFVAKPGFKLHFSLQDDSLPAASKTNWETVT
LMEDSLSVLAPAVTDVPLTAAALDQTIAAFNTVEQLLRYLNPDSWRQDLDSLYRETAMYR
PRAYQHNRQNKIDLDRLYDDVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVQRCGGNC
ACGTDNWNSCTCSPAKTSDKLHEVLKYAPEVGGYSRRQTVRVRWALEEVHLTHHERCDCV
CPSRPPR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctctgggcgcgtggcactggcgctgttgctcgcgctgctcgtgggctttacc
cggggcacacaaggccaggtagtgtccggcaaggtggtgcggtcttctaacgtgaggcaa
catgacttgtaccggaaagaagaggtcgtcacggtaacggcaacgggaggagtcatccag
agcccccgctttcctaacgcctatcccaggaacctgcagttgtcatggaaactactgtcg
ccccacaacacccgcatcaccctggagtttgactcccactttgcactggaggaaccagag
aacgaagtctgcagatatgactttgtggaggtggaggacatctcagagaccagtactatt
gtctgggggagatggtgtggtcagagagtcccccctcgtcttacctccaaaaccaacacc
ctcaaagtctccttcaagtcagacgactacttcgtggcaaagcctggcttcaaactccac
ttctctctacaggatgattctcttcctgcagcgtcaaagactaactgggagactgtgacc
ctgatggaggacagtctgtcagtgttggctccagcggtgactgatgttcctctgacagca
gcggcgttggaccagaccatagcagccttcaacacagtggagcagctcctccgctacctc
aaccctgacagctggagacaggacctggacagcttgtacagagagacagccatgtacaga
ccccgggcctaccagcacaacagacagaacaagattgacctggaccgtctgtatgatgac
gtgaaacgctacagctgtacacctcggaactactctgtcaacctgagggaggagctgagg
gccaccaacgccgtgttcttcccacgatgcctactggtgcagcgctgtggggggaactgt
gcctgtgggacggacaactggaacagctgtacctgcagcccggccaagaccagtgacaaa
ctacacgaggtgttgaagtatgctcctgaggtgggaggttattcacggcgtcagacagtt
cgtgtccgctgggccctagaggaggtccacttgacgcaccacgagcgctgtgactgtgtt
tgtccctccagaccaccccgctga
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