Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386184
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Entry
139386184 CDS
T10872
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139386184
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139386184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139386184
04090 CD molecules [BR:
ocla04090
]
139386184
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Nectin family
139386184
CD molecules [BR:
ocla04090
]
Proteins
139386184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
ig
V-set
Ig_2
I-set
Keratin_assoc
MINT_RID
Motif
Other DBs
NCBI-GeneID:
139386184
NCBI-ProteinID:
XP_070987756
LinkDB
All DBs
Position
27:complement(19485386..19558316)
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AA seq
558 aa
AA seq
DB search
MAKRLLLDYHKSLPLNGLQASTVLLLIYGFTCVCSNEVLVPERVSAVLGKNITLGCRVEV
GTNLSLTQSSWERRLPSGTITLAVFNPQFGISISPDYTRRLSFLNPSVHDATIVLEGVGF
QDIGSYTCKVATFPLGNTQASTTVNILVEPKVYVSAGSTALVDGGNESVAATCIAERGRP
AAEVSWETELFGRSEVQTQDEPNGTSTTQVRYVLEPRRHSQGHTLTCVVRHPALQTEFRI
PYVLNVQFAPEVTVVGYDQNWFVGQDNVKLDCGAKANPPAHHFSWTRLDGPMPDGVDIVN
NTFTFTRPLERNDSGLYRCEVSNDIGPRGQDVHVWIQDPPPTTAPVPTTSTPLFLDTIGT
STAPNKRRGASGHSTSPTLASLSDSSLGTIVGGAVGGVLFLVLLLILGGACFMRQRRTFR
GDYYTKQYLGPSDMQKESQLDVLQPHELQEVYGDGPNSTYKGSQELKPKPGLGGDIIYPN
DIQDRDDWGDGHRGLREGSYFPAENQNTIHHPRGLPVHTPTVTNGSPYLPEDCFDNGTDS
EYVSHMDGSVISRREWYV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagattgctactagattatcacaagagtctgccgctcaatggactgcaagct
tctacagttttgcttctcatttatgggtttacctgtgtgtgcagtaacgaggtgctggtc
ccagagagggtgagtgctgtgctggggaagaacattactctgggctgcagggtggaggtg
ggcaccaacctcagcctcacccagagctcctgggagcgtcgcctgccctcaggcactatc
accctggccgtcttcaacccccagtttggcatctccatctccccagactacaccagacgc
ctgtccttcctgaacccttccgtgcacgatgccacaatcgtcctggaaggcgtgggattt
caggacatcgggtcttacacgtgtaaagtggcgacgttcccactgggcaacacgcaggca
tccaccaccgtcaatatactagtggagcccaaggtctacgtctccgccggatctacggcc
ctggtggatggtggtaatgaatcagtggcggccacctgcatagcagagcgcggccggcct
gcagccgaggtgtcctgggagactgagctgtttggccgctctgaggtccagacgcaggat
gagcccaacggcacctccaccacgcaggtgcgctacgtgttggagccacggagacactcc
cagggccacacgctcacctgcgtggtgcgccacccggccctgcagactgagttcaggatt
ccctacgtgctcaatgtgcagtttgctcctgaggtgacggtggtaggatatgaccagaac
tggtttgttggtcaggacaatgtgaagctggactgtggagccaaagccaacccacctgcc
caccacttctcctggaccaggttggatgggccgatgcctgacggtgtggatatagtgaac
aacacttttactttcactcgtcctctggagagaaatgactctggactgtacaggtgtgag
gtgtccaatgacatcggtccacgcggtcaggacgttcatgtctggatacaagatcctccc
cccaccacagcaccagtccccacaacctctactcccctcttcctggacactattggcacc
agcacggcccccaacaagcgtcgaggagcgagcggccactccacctcacccactctggcc
tccctgtcagacagcagcctgggtaccatagtgggcggggctgtgggtggggttctgttc
ctggtgctgctgctgatcctgggcggagcctgcttcatgcgccagcggaggaccttcagg
ggggactactacaccaagcagtacctgggcccctccgacatgcagaaggagtcccagctg
gacgtgctccagccccatgagctgcaggaggtctacggggacgggccgaactctacctac
aagggcagccaggagctgaaacccaagccgggactgggaggggacataatttaccccaac
gacatccaggacagggatgattggggcgacggccacaggggcctccgggagggcagctac
ttccctgctgagaaccaaaacaccatccaccaccccagagggctgcccgttcacaccccc
acagtgaccaacggctctccctacctgccggaggactgctttgacaacggcacagacagc
gagtatgtgtcccacatggatgggtctgtgatctcacgcagggagtggtatgtctga
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