Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386190
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Entry
139386190 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 32 isoform X1
KO
K11837
ubiquitin carboxyl-terminal hydrolase 6/32 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139386190
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139386190
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139386190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139386190
NCBI-ProteinID:
XP_070987762
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Position
27:42273307..42373679
Genome browser
AA seq
1629 aa
AA seq
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MGAKESRIGFLSYDEAIKRVTDVELKRLKDAFKRTSGLSYYMAQQCFYREVLGDGVPPKV
AEVIYNSFGGTSKGLHFNNLIIGLVLLTRGRDGEKAKYLFSLFASESGGYAARDDMEAVL
RALDGEVPPSLRKCFSEGEKVNYERFKNWLLQNPEAFTFSRWLLSGGVCVTLTDDSDTPT
FYQTLAGVTHLEESDIIDLEKRYWLLKAQSRTGRFDLETFVPLVSPPIHASLGEGLFHAF
DENRDNHIDFKEISCGLSACCRGPVAERQKFCFKVFDVDRDGVLSRDEIHEMVAALLEVW
KDNRTDTLPELLTNVSDIVEGILNMHDTTKLGHLTLEDYQIWSVNSALANEFLNLLFQVC
HIVLGLRPATAEEEGQIIRGWLDREGRHGLHPGENWFLISSQWWTLWKDYVRYDRKSIVV
DQPSILSSLRNPQASATVEPAPLEPGIGEGLGVPSPASTSEERSPDAVSSASEATETQST
VVTPQAGPSATEICFARQHNMSDNNQCFSGANGHIPSLSQSQLAAQRPGAIDNQPLVNTD
PMKAPTLTMEGGRLKQSLQLVAGRDFETVPEPVWRALFHWYGANLSLPRPVIQQTKTGRA
ELELFPRYLLFLRQQPATRTPQSNIWVNMGMTSLRMFPQHLPRGNVPSPNAPLKRVLAYT
GCFSRVGTIKDIHLYLSRRLRIKDEDMRLWLYNSENYLTLLDDENHTLEGLKIQDEQHLV
IEVRNKDMSWPEEMSFIANSSKMDRHKVATEKGATGLSNLGNTCFMNSSIQCVSNTTPLT
DYFISGRHLYELNRTNPIGMRGHMAKCYGDLLMELWSGTQKNVAPLKLRWTIAKYAPRFN
GFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSNGRPDWEVASEAWENHLRRNRSIV
VDLFHGQLKSQVKCKTCGHISARFDPFNFLSLPLPMDSSMHLEITVIMLDGSTPVRFGLR
LNMDDKYTGLKKQLSELCSLKPEQILLAEVHTSNIKNFPQDNQKVRLSVNGFLCAFEIPV
PCSPTSLTSPTQTDITPVPMVNGVGVAAHPDGKPGLISNGMPSTMVHCRETTERSLANGG
VGVPNGHVSPVQDSPFIGYIIAMHRKMMRTELYFLSSQKNRASLFGMPLIVPCTVHTSQK
DLYDAVWIQVARLASPLPPQEASNHAQDCDDSMGYQYPFTLRVVGKDGSSCAWCPWYRFC
RGCAVDCTEDRASVGNACIAVDWDPTALHLRYQTSQERIVEEHCSVQQSRRAQAEPISLD
SCLKAFTSEEELGEDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRFQFVNGRWIKSQ
KIVQFPRERFDPSVYLAPREAGLNGLHSLQSRSEGEELLRIGGGETVSSISAPAGFLNIL
KASPASGRKSAPPSSISCTSSPCSSPKTGGGSGSTGHRQTRLRLPQLGSRHRLSNSKENL
EGSTREGGSDSDTEPREGRLQADTEGGLVGVRSEPEMSTTDAFSSLSDVIVMNGDSGGYS
DGLQRTEASTAPSTNLETPTTTLLHQRDNSLENIYNLYAISCHSGIMGGGHYVTYAKNPN
NKWYCYNDSSCKEVHSEEMDTDSAYILFYEQQAVDYSQFLPKTDGKKMADTTSMDEDFES
DYKKYCVLQ
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaaaggagtcaaggataggtttcctttcgtatgacgaggccattaaaagagta
actgatgtggagttgaagcggctgaaggatgcctttaagaggaccagtggcctgtcctac
tacatggcccaacagtgcttctacagagaagtactgggagacggagtccctccaaaggtt
gcagaggtcatctacaactcgtttgggggcacgtctaaaggactacacttcaacaacctc
atcattggcctggtgctgctgactagaggacgagatggggagaaggccaagtacctcttc
agcctgtttgccagtgagtctggcggctatgcggcgcgggacgacatggaggccgtacta
cgggcattagacggggaagtaccgccctctctcaggaagtgcttcagcgagggggagaaa
gtcaactatgagcgctttaagaattggctccttcagaacccggaggcgttcaccttctcc
cgttggctgctctccggaggcgtgtgcgtcaccctcacagacgacagcgacacgcccacc
ttctaccagactctggccggagtcacacacttagaagagtctgatatcattgacttggag
aagcgctattggctgctgaaagcccagtccaggaccggacgctttgacttggaaactttt
gtcccgctggtctctcctcctattcacgcttcgctaggtgaaggtttgtttcacgccttt
gacgagaaccgggacaatcacatcgactttaaggagatctcctgtggcctgtctgcctgt
tgccgggggcccgtcgccgagaggcagaaattttgtttcaaagtgtttgacgtggaccgg
gacggggttctgtcccgagacgaaatccacgagatggtagccgcactcctggaagtttgg
aaggacaatcgcacagacacactccctgagctgctcaccaacgtgtcggacatagtggag
ggaatcctgaacatgcacgacacgaccaagctgggtcacctgaccctggaggactaccag
atctggagtgtgaacagcgctctggccaacgagttcctcaacctgctgttccaggtctgt
cacattgtccttgggcttcgacctgccactgctgaagaggagggacaaatcatcaggggg
tggctggacagagagggcagacatgggcttcaccctggggagaactggttcctcatctcc
agccagtggtggacgctctggaaggactacgtcagatatgaccgcaagtccatcgtggtg
gatcagccctctatcctctcctctctgaggaatcctcaggcctctgcgaccgtcgagcct
gcccccctggagccagggataggtgaaggtctgggggtccccagcccagccagcacctca
gaggagaggtcccctgatgctgtgtccagcgcctctgaagccacagagacccaaagcaca
gtggtgaccccccaggccggcccctcagccacagagatctgttttgcccggcaacacaac
atgtcagacaacaaccagtgtttctccggggccaacggccacatcccctccctctctcag
tcccagctggcagctcagaggcctggagccatcgacaaccagcccctggtcaacacagac
cccatgaaggcccccacattgaccatggagggaggccggctgaaacagtccctacagctg
gtggcgggcagggactttgagacggtgccagaaccggtgtggagggcgctgttccactgg
tatggcgccaacctcagcctgccacgaccggtgatccagcagacgaaaacaggccgtgct
gagctggagctcttcccacgctacctcctcttcctgcggcagcagcccgccacacgcacc
ccccagtccaacatctgggttaacatgggtatgaccagcctgagaatgttcccccagcat
ctccccagaggtaacgtgccctcccccaacgctcctctgaagcgtgtcctggcctataca
ggctgtttcagccgcgtgggcaccatcaaggacatccacctgtacctgtctcggaggcta
cgcatcaaagacgaggacatgaggctgtggctctataacagcgagaactatctgaccctc
ctggatgatgagaaccacactctggagggcctgaagattcaggacgagcaacacttagtt
atcgaggttcggaacaaagacatgagctggccagaagagatgtccttcatcgccaacagc
agtaaaatggaccgacataaagttgctacggagaagggtgccacgggcctcagtaaccta
ggcaacacgtgctttatgaactctagtatccagtgtgttagcaacaccacgcccctcact
gactacttcatctcaggaagacacctctatgaactcaacagaaccaaccccatcgggatg
cgaggtcacatggctaaatgttacggagacctgctgatggagctgtggagtggaacgcag
aagaacgttgcccctctcaaactcaggtggacgatagcaaagtacgccccgcggttcaac
ggcttccagcagcaggacagtcaggagctcctggccttcctattggacgggctccatgag
gacctgaacagggtgcatgagaaaccctacgtagagctgaaggacagcaacggacgaccc
gactgggaggtcgcatcagaggcgtgggagaaccacttgcggaggaaccgttccatcgtg
gtggatctgttccacggccagctcaagtcccaggtcaagtgtaagacgtgtggtcacatc
agcgcccgcttcgaccccttcaacttcctgtctttacccctccccatggacagctccatg
cacctggagatcactgtcattatgctggatggttctacccctgtacggttcggcctgagg
ctcaacatggatgacaagtacaccggtctgaagaaacagctgagtgaactgtgtagtctg
aaaccagaacagatactactggctgaggtccacacctccaacatcaagaacttccctcag
gataatcagaaggtgcgtctgtcggtgaacggcttcctgtgtgcgtttgagatccctgtg
ccatgctcccccacttccctcacctctccaacacagacagacatcacccctgtgcccatg
gttaacggtgtgggggtggcagcgcatcctgatggtaagcctggtctgatctccaacggc
atgcccagcaccatggtgcactgcagagagaccacagagagaagcctggccaacggaggg
gtgggggtgcccaacggacacgtgtcccccgtccaggacagccccttcatcgggtacatc
atcgccatgcacaggaagatgatgcggacggagttgtatttcctgtccagtcagaagaac
cgtgccagtctgtttgggatgcccctgatcgttccctgtacggttcacaccagtcagaag
gacctgtacgatgctgtctggatacaggtggcccgtctggccagccctctgcccccgcaa
gaggccagcaaccatgcacaggactgtgatgacagtatgggctaccagtaccccttcaca
ctgagggtggtggggaaggatggcagctcgtgtgcctggtgtccctggtacaggttctgt
cgaggctgtgcggtggactgtacggaggacagggcctcggtaggaaacgcctgcatagct
gtcgactgggacccgacagccctgcacctccgctaccagacttcacaggagaggatagta
gaggagcactgtagtgtgcagcagagtcgcagggcccaggcagagcccatcagtctagac
agttgtctgaaggccttcaccagtgaggaggagctgggagaggatgagctctactactgc
tccaagtgcaagacccaccgcctggccaccaagaaactggacctgtggagactgccgcct
atactgatagtacacctgaagagattccagtttgtgaacggccgctggatcaagtctcag
aagatcgtccagtttcccagagagaggtttgaccctagtgtttacctggctccccgggag
gcggggcttaacgggctacacagtctgcaaagccgcagcgagggagaggagctactgagg
ataggaggaggagaaacggtctcctccatctccgcccctgctgggttcctcaacatcctc
aaagcctctcctgcttcaggcaggaagtcagcccctccctcttccatcagttgtaccagc
agcccctgcagcagccccaagacaggaggagggtcagggagcacaggccacagacagacc
cgcctcaggcttccccagctgggcagccgccaccgcctctccaacagcaaggagaacctg
gagggtagtaccagggaggggggcagcgactccgacaccgagcccagggagggaagactg
caggcggacacggagggtgggctcgtgggagtgaggagcgagccggagatgtccaccaca
gacgcgtttagcagcctcagtgacgtcatcgtgatgaacggggacagcggtggctatagc
gacgggctacagcgcacggaggccagtacggcgcccagcacgaacctagagacacccacc
accacccttctgcaccaaagagacaacagcctggagaacatctacaacttatatgcaatt
tcatgccattcaggtatcatgggaggaggacattatgtgacctatgccaaaaaccccaac
aacaaatggtactgttacaacgacagcagctgtaaggaagtgcactcggaggagatggac
acggactcggcctacatcctgttctatgagcagcaggcggtggactactctcagttcctg
ccaaagaccgacggcaagaagatggccgacaccactagcatggacgaggactttgagtct
gactacaagaagtactgtgtcctgcagtga
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integrated database retrieval system
