Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386243
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Entry
139386243 CDS
T10872
Name
(RefSeq) immunoglobulin superfamily member 11-like isoform X1
KO
K06791
immunoglobulin superfamily, member 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139386243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139386243
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
CTX family
139386243
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
Ig_2
ig
I-set
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
C2-set_3
Sp38
DUF2448
Betaherpes_U91
Motif
Other DBs
NCBI-GeneID:
139386243
NCBI-ProteinID:
XP_070987837
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All DBs
Position
27:9813272..9910949
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AA seq
471 aa
AA seq
DB search
MIKFHNSDLWIAWLVLFCMEGSRFDLHTGTVSVRALDVTVTQSSIQVARGQAAILPCSFS
TSAALNNLNIIWMVIPLSNANQPEQVIIYQGGQVFSLANHLNGRVGFVATMPSTSASIFI
NNTQLSDTGTYQCLVNNLPDRGGRNIGVIGLTVLVPPSVPACRVQGTLDVGADIMLMCSS
EEGIPTPTYAWEKLESLPKLPHTAMQDQMQGTVTLRNISTSTSGLYQCTASNAIAKSTCL
LNLQVVAPQPQSVGLIAGTIATGVLAVIICSLLVLVTLFYWKNKNKYEEEEIPNEIREDD
LPPKRSSSVKAFHADASSSENDTLTSTNTYNSRYWHNPKPNYDTNSYTRYNGDTRQTFPT
GQAGHTGQTGGHAAHTGHGTLAPPGSAPLACQAYSNGSHTLPPPKTLVVTTNSAPSPPTM
VRSNGSVSLKPVTVASRGGYTHSYAVSQATLERMGAVPVLVPAQSRAGSLV
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattccataattcggacctatggattgcttggctggttttattttgcatggaa
ggttcaagatttgatctgcacacaggaacagtgagcgtgagggcgttggatgtcacagtg
acccagagcagcatccaggtagcccgcggccaggcggccatcttgccctgctccttctcc
accagcgctgccctcaacaacctcaacattatctggatggtcatcccgctgtccaatgcc
aatcagcccgaacaggtgatcatctaccaaggtggccaagtgttcagtctagccaaccac
ttgaatggccgggtgggtttcgtggccaccatgcccagcacaagtgcctctatcttcatc
aacaacacccagctgtcagacacggggacctaccagtgcctggtcaacaacctccccgac
agaggggggcgcaacatcggggtcatcggcctcaccgtgctggtgcctccctcggtgcct
gcatgccgtgtccagggcacgctggacgtgggcgctgacatcatgctgatgtgcagcagc
gaggaggggatccccacgcccacctacgcctgggagaagctggagtcgctgcccaagctg
ccccacaccgccatgcaagaccagatgcaagggaccgtaacactgaggaacatcagtacc
agtacctctggtctgtaccagtgtacagcatccaacgccatcgccaagagcacctgtcta
ctcaacctgcaggttgtggcaccccagccccagagtgtgggtctcatagctggcaccatc
gccacgggcgtgctggctgtcatcatctgctccctactggtgctggtgacactcttctac
tggaagaacaagaacaaatatgaggaggaggagatccccaatgagatcagagaggacgac
ctgccccctaagaggtcgtcgtcagtgaaagcgtttcacgccgacgcctcatcctcggag
aatgacaccctgacgtccaccaacacctacaacagccgctattggcacaaccccaagccc
aactacgacaccaactcctacacccgctacaatggcgacacacgccagacgttccctacg
gggcaagcgggtcacacaggtcaaacggggggacatgcagctcacacaggacacgggaca
ctggctccgccgggctccgcccccctggcatgtcaggcctactccaatggtagccacacc
ctccccccgcccaagactctggtggtcaccaccaactccgccccctccccgcccaccatg
gtgcgcagcaatggctcagtcagcctgaagcccgtgacggtggcatcgcgtggcgggtac
acgcactcgtacgccgtaagccaggccacgctggagcgcatgggcgccgtgcccgtcttg
gtgccagcccagagcagagcaggctctctggtctaa
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