Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386264
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Entry
139386264 CDS
T10872
Name
(RefSeq) serine/arginine-rich splicing factor 7-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139386264
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139386264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139386264
Spliceosome [BR:
ocla03041
]
Common components
Common spliceosomal components
SR proteins
139386264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
zf-CCHC_3
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
139386264
NCBI-ProteinID:
XP_070987861
LinkDB
All DBs
Position
27:complement(11900271..11905773)
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AA seq
239 aa
AA seq
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MSYHSSSRSSSRNTDCKVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEYE
DARDAEDAVKGMDGKVLCGSRIRVELSTGMSRKTKHGRPSRRHFDPQDRCYQCGDRGHYA
YDCYRFSKRGGGRRSRSRSRSRSRSVSRSRGSRYRSRSRSNDRSRHRSPSYPKRRKRSGS
PVRSKSRTSVRSRSRSRSGSRARGRSASRSRSRSRSPSHKRNSRSRSPSQKKSPTPGED
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccactcgtcttctcgcagctcttctcgtaacaccgattgcaaggtctatgtt
ggcgacttaggcaacggtgctgccaagggtgagctagagcgggcgttcagttactatggc
cctttacgcacggtttgggtggccaggaaccccccaggtttcgcatttgtggagtatgag
gatgcccgtgatgcagaggacgcagttaaaggcatggatggaaaggtgctgtgcggctct
cggatccgtgtggagctgtccactggcatgtcacggaagaccaaacatggccgccccagc
cgccgccactttgaccctcaagaccgctgctaccagtgtggggacaggggccactatgcc
tacgactgctaccgtttcagcaagagggggggaggtcgtcggagcagatcacgctctcgc
tcccggtctcgttccgtctccaggtcacgtggcagccgctatcgatcccgctcccgcagc
aatgaccgcagcaggcaccgctccccatcttatcccaaacgtaggaagaggtctggttcc
cctgtgcggtcaaagtccaggacctctgttaggagtcgttcccgttctcggtcagggtcc
cgggccagagggcgctctgcgtctcgctctcgctccagatcccgctctcccagccataag
aggaatagtcgttccagatccccaagccagaaaaagagccccaccccaggcgaagattga
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integrated database retrieval system
