Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386313
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Entry
139386313 CDS
T10872
Name
(RefSeq) protein IWS1 homolog isoform X1
KO
K17498
transcription factor SPN1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139386313
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139386313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med26
Motif
Other DBs
NCBI-GeneID:
139386313
NCBI-ProteinID:
XP_070987932
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Position
27:complement(95977..129586)
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AA seq
782 aa
AA seq
DB search
MDGEEDEFFSGNHSDGGGTPVQDEHAPGSDGEEEMRNEPRHSEDENDGEGAAQAMETNGV
ASGSGNRCPERADRDSDGEAPGPADRDNKEESPPKRGGSTSDIEESPPKRGGSTSGIEES
PPKRGGSTSDIEESPPKRGGSTSDIEESPPKRGGSTSDIEESPPKRGGSTSDMEESPPKR
GGSTSDMEESPPNRGGSTSDMVESRPKRGGSTSDMEEKETKRDAAGSDSENENRPLSPAR
SRHSSARSDSEIEAPKHKAQIESDGEEGGKNKGKWKAVMHSDSEDEVEARPAKAAAGSDQ
EKESPAKLVGEVSEDDDEMPMKRKKAILSDSEGEEEKADEPVVKKSRAVSDDDNSDSDAG
SEAPDKTMAKLRELGSESEDEDDGQKVEGGKKDEKTLFGSDSDSGDEEEKMIADIFGDSG
DEEGEEFTGFNQEDLEGDKSQSQASAKKAMADDSDSDEGVDRGGGQDTSFMSDFDVMLAR
KKAQSGKRRRNRDGGTFISDADDVVSAMITKMTEAAEEDRTLNAQKKPALKKLTLLPTVV
MHLKKQDLKETFIDSGVMSAIKEWIGPLPDKSLPALKIREDLLKILQELPSVSQETLKHS
GIGRAVMFLYKHPKESRPNKDLALKLINEWSRPIFGLTSNYKGMTREERQQRDLDQQMPQ
KRRLSQPQKVERSKEPDVFSPQQLSSGGQTPHRDLEKVLTGEEKALRPGDPGFCARARVP
MPSNKDYVVRPKWNVESESRAAPVKKGMSRVDKQLRRFADIKRMTKTGHAVKISVQGNRM
PL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgaagaggacgaattcttctccgggaaccactctgatggtggtggcaccccg
gtacaggacgaacatgctcctggttcggatggggaagaggagatgaggaatgagccacgc
cactctgaggatgagaatgatggtgagggagctgctcaggccatggagacaaacggcgtg
gccagcgggtcaggcaacaggtgccccgaacgggcggacagggactctgacggggaggcc
cctgggcctgcagacagagataacaaggaggagtccccgcccaaacgcgggggcagcacc
tccgacatagaggagtccccgcccaaacgcggaggcagcacctccggcatagaggagtcc
ccgcccaaacgcggaggcagcacctccgacatagaggagtccccgcccaaacgcggaggc
agcacctccgacatagaggagtccccgcccaaacgcggaggcagcacctccgacatagag
gagtccccgcccaaacggggaggcagcacctccgacatggaggagtccccgcccaaacgg
ggaggcagcacctccgacatggaggagtccccgcccaatcggggaggcagcacctccgac
atggtggagtcccggcccaaacggggaggcagcacctccgacatggaggagaaagaaacc
aaacgggatgcagccgggagcgactctgagaacgagaatcggcccctatccccagcccgg
agcagacactcgtctgcacgcagtgactctgagattgaggcgcccaaacacaaagcgcag
atagagtctgatggagaggagggtggcaagaataaagggaagtggaaggctgtaatgcac
tccgacagtgaggatgaggtggaggctcggccagcgaaagcagctgcaggcagtgaccag
gagaaggagagtcccgcaaaactggtgggggaagtgagtgaggatgacgacgagatgcca
atgaagaggaagaaagccatcctgtcagacagtgaaggtgaggaggagaaggctgacgaa
ccagtggtgaagaagagccgcgccgtgtctgacgatgacaactccgacagtgacgcaggc
tcggaggcgcctgacaaaaccatggccaaactgcgggaactgggatcagaaagcgaagac
gaggatgatggacagaaggtggaaggagggaagaaggacgagaaaacactgtttggtagc
gacagcgattcaggcgacgaggaagagaaaatgattgcagacatttttggtgactctggc
gatgaagagggggaagagtttacgggtttcaatcaggaggatctggagggggataagagc
caatctcaggcctctgcgaagaaagcaatggcagatgactctgactctgatgagggcgtg
gacaggggtggtggccaagacaccagtttcatgtcggacttcgacgtgatgctggctcgt
aagaaggcccagagcgggaagcgccgacggaaccgcgacgggggaacgttcatcagtgat
gctgatgacgtggtcagcgctatgatcaccaagatgacagaagctgcagaggaggacaga
acactgaacgctcagaagaagccagcgttaaaaaagctgaccctcctccccactgtagtt
atgcacctaaaaaagcaagaccttaaggagacgttcattgacagcggggtgatgtcggct
atcaaggagtggatcggcccgttgccagataagagtcttccggccctcaaaatcagagag
gatctcctcaagatcctccaggaactccccagtgtgagtcaggagactctcaaacacagc
gggataggtcgagccgtcatgttcctatacaaacaccccaaggagtcgcgccccaacaag
gacctcgctctcaaactcatcaatgagtggtccaggcccatctttggcctgacatctaat
tacaagggcatgacgcgcgaggagagacaacagagagacctcgaccagcaaatgccgcaa
aaaagacgcctcagtcagcctcaaaaggtggagaggtccaaggaaccagatgtcttctcc
ccacagcaactcagctcagggggacagactcctcatagagacctggagaaagtgctgacg
ggagaagagaaagctctgcgcccaggcgaccctgggttctgtgcccgggccagggtgccc
atgccatccaacaaggactacgttgtgcggcccaaatggaacgtggagagcgagtccaga
gcagccccggttaagaagggcatgtcacgggtggacaaacagttgcgtcgcttcgctgac
ataaagcgtatgacgaagacgggccacgcggtgaagatcagcgtccagggcaaccggatg
cccctctga
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