Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386339
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Entry
139386339 CDS
T10872
Name
(RefSeq) huntingtin-interacting protein 1-like isoform X1
KO
K04559
huntingtin interacting protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139386339
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
139386339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
BALF1
DUF3141
Motif
Other DBs
NCBI-GeneID:
139386339
NCBI-ProteinID:
XP_070987971
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All DBs
Position
27:complement(12519080..12564795)
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AA seq
1055 aa
AA seq
DB search
MDRVKSSMQQVPNPIHKALIRRTGGANSFELEKENFERGQAVSINKAINTQEVAVKEKHA
RTCILGTHHEKGAHTFWAAVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVIKDSMRNKAD
LSDMSRMWGHLSEGYGKLCSIYLKLLITKMEFHVKNPRFPGNLQMSNRQLDEAGENDVNN
FFQLTVEMLDYLECELNLFLGVFSSLDMSRSVSVTSAGQCRLAPLIQVILDSSHLYDYTV
KLLFKLHSCLPADTLQGHRDRFQEQFKKLKSLFYRSSNLQYFKRLIQIPQLPENPPNFLR
ASALSEHISPVVVIPAESSSPETEHMVDLVTEDLVDTDIPVQPAAVVEPRFDDLFGTSAA
TDPFNFNSQNGMRKDDKDRLIEQLTREIQALREELESFRLESGRLRQALRGRVDELEAEL
AEQSHLRMQALGEGEFLRAELDDLRRVKEDTEKEQRSLTEIERKAVANEQRYVKLKEKYT
ELVQSHADLLRKNAEVTRQMTVARAVEDEMDSVRREMHEKVKAAKEAAERRRTSNEQEQV
EQLQELQRELISSRAALDTLKSTMASSQQSSEELSSQLSTVESEKVELAESLLKKEEELA
GLGEELERVQSSLASERESGVKTAEALQNQLNEKESREQALESQLVAARWSALQGTVEEA
ERIVQDSLAQLDDPAHISCTSSADYLASRCQASLDCMARLHSARDGYLADNTGVSELVRA
VTHLAHLVGDTIVQGSATSHMVPVEQADALSDSVKACGAEALSLLGQMKEQESLATAEGA
MLRAALDGILATAEKLRPRGLELQQGELGDLVEQEMAATSAAVESAAARIEDMLNKSRAV
DTGVKMEVNERILASCTDLMQAIKVLVLSSKDLQRDIVESGRGAASMKDFYVKNSRWTEG
LISASKAVGWGATVMVDAADLVVQGKGKYEELMVCSHEIAASTAQLVAASKVKADKDNAN
LGRLKLASKGVTQATAGVVASTKSGKSQIEEKDTMDFSSMTLTQIKRQEMDSQVSVLELE
TKLQKERERLGELRKKHYELAGVAEGWGEEDEGTG
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagtgaagagttccatgcagcaagtaccgaacccaattcacaaagcgctgatt
cgtcggaccggtggtgccaacagtttcgaacttgaaaaggagaactttgaacgcggtcag
gctgtgagcatcaacaaggccatcaacacgcaggaggtcgccgtcaaagagaagcatgcc
aggacctgtatcctggggacccaccatgagaagggcgcccacaccttctgggcggcggtc
aaccggctgccgctctccagcaatgcggtgctctgctggaagttttgccacgttttccac
aagctgctgcgagacggccatcccaatgtgataaaggactcgatgaggaacaaggcggac
ctcagtgacatgagcagaatgtggggtcacctgagtgaaggctatgggaagttgtgcagc
atctacctcaaactgcttatcaccaagatggagttccacgtcaaaaatccccgtttccct
ggcaaccttcagatgtcaaacaggcagcttgacgaggcgggagagaacgacgtcaacaac
ttcttccagttgacagtggagatgttggactacctggagtgtgagctcaacctcttcctg
ggtgtgttcagctctctggacatgtcgcggtctgtgtcggtgacgtcggcgggccagtgt
cgcctggctccgctgatccaggtcatcctggacagcagccacctgtacgactacaccgtc
aagctgctcttcaagctgcactcctgccttcctgctgacacactccagggccacagagac
cgcttccaggagcagttcaagaagctgaagagtctgttctaccgctccagtaacctgcag
tacttcaagaggctcattcagatcccacagttacctgagaacccacctaacttcctgcgg
gcgtcggcgttgtcggagcacatcagtcccgtggtagtcattccagctgagtcgtcctcc
cccgagacggaacacatggtggacctggtgacagaggacctggtggataccgacatcccc
gtccagccggctgctgtggtagaacccaggttcgacgacctctttggcacgtccgccgcc
acggacccattcaatttcaacagtcagaacgggatgcgcaaggacgacaaggaccgcctg
atcgagcagctgacacgggagatccaggccctcagggaggaactggagtccttcagattg
gagagtgggcgtctgcgccaggcgctgcgggggcgtgtcgatgagctggaggcggagcta
gcagagcagagccacctgaggatgcaggcgttgggagagggcgagttcctgcgggcggag
cttgacgacctgcgccgggtcaaagaggacacggagaaagagcagcgaagcctcaccgag
atcgagaggaaagcggtggccaacgagcagcgctacgtcaagctgaaggagaagtacaca
gagctggtgcagagtcacgctgacctgctgaggaagaatgcggaggtgactcgtcagatg
acggtggcgcgggcggttgaggacgagatggacagcgtgaggagagagatgcatgagaag
gtcaaggctgccaaggaggccgcggagagacggaggacttcaaatgagcaggaacaggtg
gagcagctgcaggagctgcagagagagctgatctccagcagggcggcgctagacaccctg
aaaagcaccatggcctcgtcccaacagtcgagtgaggagctcagttctcagctctcgact
gtggaatcggagaaggtggagctggcggaatccttgttgaagaaagaggaggagcttgca
ggcctgggggaggagcttgagcgtgttcagagcagcctggccagtgagagggagagcggc
gtgaagactgccgaggccctacagaaccaactcaatgagaaggagagcagggagcaggcc
ctggagagccagctggtggcagcacgctggtccgccctacaggggactgtggaggaggca
gagaggatagtccaggactcactggcccagcttgacgacccggcacacatcagctgcacc
agctctgcagactacctggcgtccaggtgtcaggcctctctggactgtatggccagactt
cactctgccagagacggctacctggcagacaacacaggtgtttcagaactggtgcgggca
gtgacccatcttgcccacctggtgggtgacaccattgttcagggcagtgccacctctcac
atggtgccagtggagcaagcggacgcgttgtcagacagtgtgaaggcgtgtggggccgag
gccctgtccctgctgggtcagatgaaggagcaggaaagcctggctacggcagaaggcgcc
atgctgagggcagcactggatggcatcctggccaccgcagagaaactgcgtcctcggggt
ctggagctgcagcagggggagctgggagatctggtggagcaggaaatggccgccacatcg
gccgccgtggagtcagcagctgccaggatagaggacatgctcaacaagtcacgtgctgtc
gacacaggggtgaagatggaggtcaacgagaggatcctggcctcctgtacagacctgatg
caggccatcaaagtgctcgtgctgtcttccaaagatctgcaaagggacattgtggagagt
ggcagaggggcagcatccatgaaggatttctatgtcaagaactctcgctggacggaaggc
ctgatctcagcctccaaagccgtgggctggggcgccacagtcatggtagatgcagcagac
ctggtggtgcagggcaagggcaagtacgaagagctgatggtgtgttcgcatgagatcgca
gccagcactgcacagcttgtggccgcatccaaggtgaaggcagacaaagataacgccaac
ctgggccgcctgaagctggcatccaaaggggtcacacaggccaccgccggggttgtagcc
tccaccaagtccgggaagtcccagatcgaggagaaagacaccatggatttctccagtatg
accctcactcagatcaagaggcaggagatggactcacaggtttctgttctagagctggag
acaaagctgcagaaggagcgagagcgtctaggggagctaaggaagaagcactacgagctg
gccggggtggccgagggctggggggaggaggacgaaggtacaggttga
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