Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386354
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Entry
139386354 CDS
T10872
Name
(RefSeq) RILP-like protein 1 isoform X1
KO
K13883
Rab-interacting lysosomal protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139386354
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139386354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139386354
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
139386354
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH1
RILP
HmpF
ATG16
Motif
Other DBs
NCBI-GeneID:
139386354
NCBI-ProteinID:
XP_070987991
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All DBs
Position
27:17772281..17790953
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AA seq
437 aa
AA seq
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MEKDFDRNDQKQDVKKTEVCFERTCSALTVDDVYEIAKLIGSEVETLIDGYGKESATGLV
PKIVKVLELLESFASRNHAHKSKEEELLKAFETLNVQKQKKTRNVKECEESKSEIQRQEV
QEEVEKQRRRCEELQAQVLHLQMEKQELQSCLRGNHVQEDRVQRQERELMLKLKEVVDKQ
RDELRAKVQQIGSVSKEVEALQEQLERFMKMNGELRHKQSIVTAQVKNAVERKADMEADL
REKQKEIERLTTQLEKANTAAGTANPCKTEVDLTDKLVIDLKDPNRPCFTKQEVREMLTE
RNELKANLFLVQEELSYYQREILNDERCPGFLLDAVRSAIKKQKTVIKAKMLGMPEDECS
SDEEKGPLFERRAETETGTDSTDSKPQESRIRNLFGFLTRSGSNHSSRSPGENNAASSWE
IIDDTDNTAETEPRQSP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggattttgatagaaacgatcaaaagcaagacgtcaagaagacagaggtgtgt
tttgaaaggacatgttcagcactaactgtggacgatgtatacgaaatagctaaattgatt
ggctcggaagtggaaacacttattgacggctacggtaaagagagcgccacaggactggtg
cctaaaattgtcaaagttctagaacttttggagagcttcgcatcgcggaaccatgctcac
aagtcaaaagaagaagaattacttaaagcgttcgaaacacttaatgtacagaaacagaag
aagacgagaaatgtgaaagaatgcgaagaaagcaagagcgaaatacaacggcaggaggtg
caggaggaggtggagaagcagaggaggaggtgcgaggagctgcaggcccaggtattgcat
ctacagatggagaaacaggagttacagagctgcctgaggggcaaccatgtccaggaagac
cgtgtccaacggcaggagcgggagttgatgctgaaactgaaggaggtggttgacaagcag
agagatgagttgagggccaaagtacagcagataggaagcgtgtctaaggaggtggaggcg
ctgcaggagcagttggagcgcttcatgaagatgaatggggagctgagacacaagcagagc
atcgtcacggcccaggtgaagaatgctgtggagaggaaggctgacatggaggcagacctc
agagagaaacagaaagagatagaacgcctcaccacccagctggaaaaggccaacactgct
gctggcacggccaatccgtgtaagaccgaagtggacctgactgacaagctggtgatagac
ctgaaggatcccaacagaccctgtttcaccaagcaggaggtcagagagatgctgacagag
aggaacgagctcaaagccaacctgttcctggtgcaggaggaactctcctactaccagagg
gagatcctgaatgatgagcggtgtccaggcttcttgttggacgctgtacgttctgccata
aagaaacagaaaactgtcatcaaggccaagatgttgggcatgccagaggacgaatgcagc
agtgatgaggagaaaggacccctgtttgagaggagagcagagacagaaaccgggacagac
agcactgacagcaaaccacaagagtctcgcatcaggaacctctttggcttcctgacccgc
tccggcagcaaccacagcagccgtagtcccggtgaaaacaacgctgcttcttcctgggaa
atcatcgacgacactgacaacactgcggagacagaaccccgacaatcaccatga
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