KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386406
Entry
139386406         CDS       T10872                                 
Name
(RefSeq) cullin-5
  KO
K10612  cullin 5
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139386406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139386406
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139386406
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     139386406
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     139386406
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 PTPlike_phytase
Other DBs
NCBI-GeneID: 139386406
NCBI-ProteinID: XP_070988081
LinkDB
Position
27:16241419..16259046
AA seq 780 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQEAVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQNRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADTKLRE
EEKRAVRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLM
DKVPSGIEPMLKDLEDHIMNAGLADMVAAAETITSDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTT
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSDDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKRNHSGRKLHWHHLMSNGIITFKNEMGHYDLEVTTFQL
AVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPSVSSPKDF
TDSTLFYVNQDFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttgttaaagaataaaggctccttgcagtttgaggacaagtgggac
ttgatgaggcccattgttctcaagctgctgagacaggaggctgtcaccaagcagcagtgg
ttcgacctcttctcagacgtccatgctgtgtgtctgtgggatgataagggcccagctaag
atccaccaggccctcaaagaagacatcctagacttcatcaaacaagctcagaaccgtgtg
ttgagtcaccaggatgacacagcgttactgaaggcctacattgtggagtggcgaaagttc
ttcacgcagtgtgacatcctgcccaaacccttctgtcagctggagatcacactgatgggg
aagcagggcagcaacaagaagtctaacgttgaggacagcatcgtacgcaagttgatgttg
gacacatggaacgagtcaatcttctccaacataaagagccgtcttcaggacagtgctatg
aagctggttcatgctgagaggctgggagaggcttttgactcccagctggttataggagta
cgagaatcatacgtcaacctatgctctaaccctgaagacaagctccagatctacagagat
aactttgagaaggcctacctggactcaactgagaggttctacagaacacaggccccatca
tacctacagcagaacggagtccagaactacatgaaatatgcagacacaaagctaagagaa
gaggagaagagggcagttcgataccttgagactcgtcgtgaatgtaactctgtccaagct
ctgatggaatgttgtgtgaacgctctggtgacgtcgtttaaagaaaccatcctggctgaa
tgtcccggcatgatcaaacgcaacgaaacagacaagctccacctgatgttttccctgatg
gataaggttcctagtgggatagagcccatgctgaaagatctggaggatcacatcatgaac
gctgggctggctgatatggtggctgctgcagagactatcacttctgactctgagaagtac
gtggagcagctgctgacattgtttaaccgtttcagtaaactggtgaaggaggcttttcag
gatgaccctcgattcctcaccgccagagacaaggcctacaaagctgtggtgaacgatgcc
accatttttaaactggagctgcccctcaaacagaaaggggtaggtctgaagacccagcca
gagtcgaagtgtccagagctgctagctaactactgtgacatgctgctgaggaaaacaacc
ctgagcaagaaactcacatcagaggagatagaactcaaactcaaagaagtgttgctggta
ttgaagtatgttcagaataaggatgtgtttatgaggtaccataaagcccacctgaccaga
agactgatcctggacatctcagccgacagtgaaatagaagagaacatggtggagtggctc
agggaggtggggatgcctgcagactatgtgaataagctggcgaggatgttccaggacatt
aaagtatcggatgatctcaaccaggtcttcaaggagatgcacaaacacaacaagctggct
ttaccagctgacagtgtgaatataaagatcctgaatgcgggtgcttggtcgaggagcagt
gagaaggtgtttgtgtctctgcctactgagctggaggatctgatcccagaggtagaagac
ttctacaagaggaaccacagcggaaggaaactacactggcaccacctcatgtccaatggc
atcatcaccttcaagaacgaaatgggtcattatgacctggaggtcacaacctttcagctg
gctgtcctatttgcctggaaccagcggccgcgggagcgaatcagcttcgaaaaccttaaa
ttggccaccgagcttcccgatgctgagctacgacgcacactctggtctctggtagcgttc
cctaagctgaagagacaggtgttgtcctatgagccttcagtctcctcccctaaagacttc
acagacagcaccctgttctatgtcaaccaggacttctctctcattaaaaactccaaggtc
caaaaaaggggcaagattaatctgattggtcgattgcagctgaccacagagcgaatgaga
gaggaggagaatgagggcatcgtccagctgagaatattaagaacccaggaggccatcatc
cagattatgaagatgaggaagaggatcagtaacgctcagctacaaacagaactggtagag
atcctcaagaacatgttcctgccccagaagaagatgatcaaggaacagattgagtggctc
atcgaacacaaatacatcaaacgggacgagacagacatcaacacctttatctacatggca
tag

DBGET integrated database retrieval system