Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386413
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Entry
139386413 CDS
T10872
Name
(RefSeq) vacuole membrane protein 1-like
KO
K21248
vacuole membrane protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139386413
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GFIT
Motif
Pfam:
VTT_dom
Wzz
SARAF
Motif
Other DBs
NCBI-GeneID:
139386413
NCBI-ProteinID:
XP_070988090
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Position
27:complement(22844982..22866656)
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AA seq
407 aa
AA seq
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MAKNGASCEQPQKRGTKDKQNGHFADSAVSERRQKDREERLALVLWRRPIVTLNYFLLET
FITLKEWTLKLWQRRGTVFLILVLCSLFSLAYSTEGAHQKYVQYLEKRFLWCAYWVGLGI
LSSVGLGTGLHTFLLYLGPHIASVTLAAYECGSTDFPEPPYPDQIICPEGGVEGSISLWS
IVSKVRLEACMWGAGTAIGELPPYFMARAARLSGADPDDEDYEEFEEMLEQAQTAQDFVT
RAKLGVQNMVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIVKMH
IQKLFVIITFSKHIVEQMVSLIGSLPRVGPSIQKPFSEYLEAQRSKLHHHTGAGTPATEN
WLSWVFEKVVLVMVCYFIFSIINSMAQSYAKRRQQSRQQRYTEEKTK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatggggcaagctgtgaacaaccacagaagcgaggaaccaaagacaaacag
aatggacattttgcagactccgcggtgagtgagaggaggcagaaagatcgggaggagcgt
ctcgctctggtgctgtggaggaggcctatcgtcacactaaactacttcctcttggaaacc
ttcatcacactaaaggaatggacattaaagttatggcaaagaaggggtacagtgttcttg
atcctggtattgtgttcactcttctcccttgcctactccactgagggagcacaccagaag
tatgtgcagtacctggagaagaggttcctgtggtgtgcctactgggtaggtttgggcatc
ctgtcctcagtaggccttgggactggcctacataccttcctactatacctgggtccacac
atagcatcagtcaccctggctgcgtacgagtgtggttctacagacttccccgagcccccc
tacccagaccagatcatctgtccagagggaggagtggagggcagcatctcactctggtcc
attgtctcaaaggtccgcctggaagcctgtatgtggggtgcaggtacagctattggggag
ttgcccccctacttcatggcccgagcagccaggctatctggagcagacccagacgacgaa
gactatgaggagtttgaggagatgctggagcaggcacagactgctcaggattttgtcaca
agagcaaaactgggcgttcagaacatggtgcagaaagtgggattctttgggattctagcc
tgcgcctcgatacctaatcctctgtttgacctggctggtataacatgtggccacttcctg
gtaccattttggaccttctttggagcgacgcttattgggaaagccatcgtcaagatgcac
atacaaaaactgtttgttattataacgttcagcaagcacatagtggaacagatggtgtct
ctgatcgggtctctgccgagggtaggtccctccatacagaagcctttcagtgagtacctg
gaggcccagaggagtaaactccaccaccacactggcgctggcaccccggcgactgagaac
tggctgtcatgggtctttgagaaggtggttctggtcatggtctgttactttatcttctcc
atcatcaactccatggctcagagctacgccaagcgacgacaacagagtcggcagcagagg
tacactgaggagaaaaccaaatga
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