Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386429
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Entry
139386429 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Pattern recognition receptors [BR:
ocla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139386429
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GFIT
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NCBI-GeneID:
139386429
NCBI-ProteinID:
XP_070988121
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Position
27:complement(1790747..1808482)
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AA seq
1078 aa
AA seq
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MEAQCKCSKGQCSKMSLSREREEGPASKMSLSGGHDTKTKRPIKQERPTSPVTSCVSMKS
DKSMNCPIMFRGGDLSTEQRHQHEGSESEILIGQSSQSHQTDLASIFSLLEENIMTFVKN
ELKMFKRILSPELPEGFESQKQEKEVVDTEDEKQESSARXGALKITLHILRKMNQKELAD
TLEKDSDELDVICQRELKSNLKKKFQCVFEGIAEHGNPTLLNKIYTELYITEGGTGEVNN
EHELRQIETTSRKQARPEAPIKCKDIFKPLTGQDKRIRTVLTKGVAGIGKTVSVQKFILD
WAEGKANQDVQFIFSFPFRELNLMKGEQVTLIELLNHFSMETKQSRISNFDKYNVLFIFD
GLDECRLPLDFQKNKICCDVTKSTSMDVLLTNLIKGNLLPSALLWITTRPAAANKIPSVC
VDQVTEVRGFNDPQKEEYFRKRFSDDSLSSRIISHIKTSRSLHIMCHIPVFCWISAIVLE
PMLKHKREEMPKTLTEMYTHLVVFHTKQRNEKYLGNEETAPHWNQDSILSLGKLAFQQLV
NGNLIFYEEDLKEAGIDVNEASVYSGLCTQLFKEECGLYQDMVYCFVHLSIQEFLAAVYV
FLTFINNNENLMDKLQTKDEPEVFFYKSAVDKALQSETGNLDLLLRFLLGLSLESNQKHL
QGLLTKTRSNSQTHEETVKYIKEKIRENPSPERCINLFHCLNELNDHSLVEEIQGYLRSG
SLSKPSLSPAQWSALVFDLKKYSRSEEGLRRLLPVVKASRAVRLSGCGVTEEGCASLVSA
LKSNPSHLRELDLSNNDLKDSGVKLLSAGLGNPHCKLETLRLSRCQVTEEGCASLASALR
SNPSHLRELDLSYNHPGDSGVRLLSAGLENPHCRLENLNVEHGGEYTMKPGLRKYFCDLT
LDPNTVNRLLSLSEENRKVTRRREKQPYPDHPERFEGCEQVLCREGLTGCCYWEVEWSGS
WAGIGVTYKGISRRGQVKDCCLGWNDKSWSLFCYDNSYTAWHNNNPTTIDIPSSSSHRVG
VYLDWPAGTLSFYRASSDTLTHLYTFTSTFTEPLYPGFHLWYEDSSVSLCQTQHDVSL
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccagtgcaagtgctcaaagggtcagtgctctaaaatgagtctctctcgggag
agagaggagggccctgcctctaaaatgagtctctctggggggcatgacaccaaaactaag
agaccaatcaagcaggagagaccaacctcccctgtaaccagctgtgtgtccatgaagagt
gacaagtctatgaactgtcctataatgtttagagggggagacctttctactgaacaaaga
caccaacacgagggatcagagtcagagattctcattggtcagtcttcccaaagtcatcaa
acagacctggcctccatattcagtttgctcgaagagaatattatgacatttgtgaagaac
gagctgaagatgttcaagaggattcttagtccagaactcccagaaggctttgagagtcag
aagcaggaaaaggaagtggtggacactgaagatgagaagcaggagagcagtgctagatag
ggggctctgaagatcacactgcacatcctgaggaaaatgaaccagaaggagcttgctgac
acattggagaaagattcagatgagcttgatgtgatttgccaacgtgaactcaaatctaat
ctgaagaagaagtttcaatgtgtatttgaggggatcgctgaacatggaaacccaacactt
ctcaataagatctacacagagctctacatcacagagggtggaacaggagaggtcaataat
gaacatgagctgagacagattgagacaacatccaggaaacaagcaagaccagaggctcca
atcaaatgtaaagacatcttcaaacccttaactggacaagacaaacgtatcagaactgtg
ctgacaaagggagtcgctggcattggaaaaacagtctctgtgcagaagttcattctggac
tgggctgaaggaaaagcaaatcaggatgtccaatttatattttcattccctttccgggag
ctgaatttgatgaaaggtgaacaagtcactttgattgaacttctcaatcacttctcaatg
gaaaccaaacaatcaagaatttccaacttcgacaaatacaacgttttgttcatctttgat
ggtctggatgagtgccgactgcccctagacttccagaagaacaagatctgttgtgacgtc
acaaagtcaacctcaatggatgttctgctgacaaatctcatcaagggaaatctgcttccc
tctgctctcctctggataactacccgacctgcagcagccaataagatcccctcagtgtgt
gttgaccaggtgacagaggtacgagggttcaatgacccacagaaggaggagtacttcagg
aagcgattcagtgatgattccctgtccagcagaatcatctcacacataaagacatcaagg
agccttcacatcatgtgccacattccagtcttctgttggatttctgcaatagtccttgaa
cccatgctgaaacataagagagaagagatgcccaagactctgactgagatgtacacacac
cttgtggtgtttcataccaaacagaggaatgaaaagtatcttgggaatgaagagacagct
ccacattggaatcaagatagcattctgtcactgggaaaactggcttttcaacagcttgtg
aatggcaatctgattttctatgaagaagacctgaaagaggctggaattgatgtcaatgaa
gcctcagtgtactcaggattgtgcacacagctctttaaagaggaatgtggactgtaccag
gacatggtgtactgctttgtgcatctgagcattcaggagtttctggctgctgtatatgtg
ttcctcacatttatcaacaacaatgagaatctaatggacaaactgcaaacaaaagatgag
cctgaagtttttttctacaagagtgctgtggataaagccttacaaagtgagacgggaaac
ctggaccttttgctccgcttccttctgggcctctcactggagtccaatcagaagcactta
caaggtctactgacaaagacaagaagcaactcacagacccatgaagaaacagtcaagtac
atcaaggagaagatcagggagaatccctctccagagaggtgcatcaatctgttccattgt
ctgaatgaactgaatgaccattctctagtggaggagatccaaggctacctgagatcagga
agtctctcaaaacccagtctgtcacctgcacagtggtcagctctggtgtttgacctgaag
aaatactccagatcagaagaaggtcttcggaggctactgccagtggtcaaagcctccagg
gctgttcggctgtcaggctgtggagtcacagaggaaggctgtgcttctctggtctcagct
ctgaagtcaaacccctcacaccttagagagctggacctgagtaacaatgacctgaaggat
tcaggagtgaagctgctctctgctggactggggaatccccactgtaaactggagactcta
aggctgtcacgctgtcaagtgacagaggaaggctgtgcttctctggcatcagctctgagg
tcaaacccctcacacctgagagagctggacctgagctacaatcacccaggagactcagga
gtcagactgctctctgctggactggagaatccacactgcagactggagaatcttaatgtg
gaacatggcggagagtacacaatgaaacctggacttagaaaatatttctgtgatctcaca
ctggacccaaatacagtaaacagactcctctctctgtctgaggagaacagaaaggtgaca
cgtaggagagagaagcagccgtatcctgatcacccagagagatttgagggctgtgaacag
gtgctgtgtagagagggtctgactgggtgctgttactgggaggtagagtggagtgggagt
tgggctggtataggagtgacatataaaggaatcagcaggagaggacaggttaaggactgt
tgtcttggatggaatgacaagtcctggagtctgttctgctatgacaacagttacactgct
tggcacaataataatcccactaccatagacatcccctcctccagctcccacagagtagga
gtgtatctggactggccagccggcactctgtccttctatagagcctcctctgacacactg
acccacctgtacacattcacctccacattcactgagcccctctatccagggtttcatctt
tggtatgaagactcctcagtgtccctgtgtcaaacacaacatgatgtttcactctaa
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