Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386479
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Entry
139386479 CDS
T10872
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139386479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139386479
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
139386479
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
139386479
NCBI-ProteinID:
XP_070988134
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Position
28:complement(21566073..21652015)
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AA seq
652 aa
AA seq
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MSESNSNAACTADQNGAVPGEPVKTDKNSRRGNWGNQIEFILTSVGYAVGLGNVWRFPYL
CYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFASQGCLGVWRISPMFKGVGYGMMVVS
TYIGIYYNVVICIAFYYFFSSMTNLLPWTYCNNPWNTPTCNGVVTPRGINNTLANVTRSL
VTGAAEVAVEVVNKTKRTSPSEEYWKHYVLQISDDIGNFGEVRLPILGCLAVSWVVVFLC
LIRGVKSSGKVVYFTATFPYVVLTILFIRGITLEGAVTGIKYYLTPQWHKILDAKVWGDA
ASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATSVYAGFVIFSILGFMAHH
LNVDVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAI
VDEIGTDWIVRNKTVVTGGVAIVGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMC
ICIMYVYGHKKYFKDVEMMLGFPPPIFFRVCWRFVSPIIISFILIFTVIQYKPITYNDYV
YPGWSLAIGFLMAMSSVICIPIYALYKIAKSEGTTFLERLKNSCKPDVKWGPALSEHRLG
LYATPGSEGEGEVRPLKEELKEKEKEDEKRDEISLTIQGSNGSTAHNTTPSA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaacagcaatgcagcctgtacagccgaccagaatggagctgttccagga
gaacctgtgaagacggataagaactccaggagagggaactggggaaaccagatagagttt
atcctcaccagcgtgggctatgccgtgggcctgggaaacgtatggaggttcccctacctc
tgctacagaaatggaggaggagccttcatgttcccctacttcatcatgctggtgttctgt
gggatccccctgttcttcctggagctctcatttggacagttcgccagccagggatgtctg
ggggtttggaggatcagccccatgttcaaaggtgtgggctacgggatgatggtggtgtcc
acctacatcggtatctactacaacgtggtgatctgcattgccttctactatttcttctct
tccatgaccaacctgctgccgtggacctactgcaacaacccctggaacacgcccacctgc
aatggtgtggtgactcccaggggcatcaacaacaccttggccaacgtcacccgcagcttg
gtcaccggggccgctgaggttgccgtggaggtggtcaataagaccaagaggaccagcccc
agcgaggagtactggaaacactacgttctgcagatctcagacgacatcgggaatttcggt
gaagtccgtctccctattctgggatgtctggccgtgtcatgggtggtggtcttcctctgt
ctcattagaggagtcaagtcttcaggcaaggtggtgtacttcacagccacattcccctac
gtggtgctgaccatcctcttcatcagaggcatcaccctggagggagctgtcaccggcatc
aagtactaccttaccccacagtggcataagatcctcgacgctaaggtgtggggagacgct
gcctctcagatcttctactctctgggctgtgcatggggagggctcatcactatggcctcc
tacaacaagttccacaacaactgctacagagacagcatcatcatcagcatcacgaactgt
gcaaccagcgtgtatgcaggctttgtcatcttctccatcctgggcttcatggcccaccac
ctgaacgtagatgtatctgaggtggccgaccacggtcccggcctggccttcgtggcctac
ccagaggccctcactctgctgcccatctcccccctctggtccctgctcttcttcttcatg
ctcatcctgctgggcctggggacgcagttctgcctgctggagaccctggtgacagccatt
gtggatgagattggtactgactggatcgttaggaacaagacggtagtcacaggaggagtg
gctatagtgggcttcctgctgggggtgcctctcaccacacaggctgggatctactggctg
ctgctgatggataactatgctgctagtttctctctggttatcatctcctgcatcatgtgc
atctgtatcatgtacgtctatggacacaagaaatacttcaaggatgttgagatgatgctg
ggtttcccccctccaatcttcttccgggtctgctggagattcgtgtcccccatcatcata
tcttttatcctgatcttcacagtgatccagtacaagccgatcacctacaacgactatgtg
taccccggctggtctctagccatcggcttccttatggccatgtcctccgtcatctgcata
cccatctatgctctctacaagatcgccaagtctgagggaaccacatttttagagcggttg
aagaattcgtgcaagccagacgtgaagtggggcccggccctgagtgagcatcggctaggc
ctctacgccaccccaggctcagagggagagggggaggtgcgtcccttgaaagaggagctg
aaggagaaggagaaggaggatgagaagagggatgagatcagcctcaccatccagggcagc
aacggctcaacagcacacaacactacccccagcgcatag
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