Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386490
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Entry
139386490 CDS
T10872
Name
(RefSeq) complement component C8 alpha chain
KO
K03997
complement component 8 subunit alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139386490
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Motif
Pfam:
MACPF
EGF_C8A_B_C6
Ldl_recept_a
TSP1_spondin
TSP_1
EGF_Teneurin
SNAD4
Motif
Other DBs
NCBI-GeneID:
139386490
NCBI-ProteinID:
XP_070988160
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Position
28:31141757..31149389
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AA seq
615 aa
AA seq
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MSSFSSRSSFISNMNRLICVLLGSYILLLVLNKSLTVDATEYSWNMAETRTGQSAIRRVR
SVNKPAPINCKMKMWSSWTPCDSCTDKKFRFRYVEKASQFGGRQCLDSQWEELACPTAQA
VCWEPDICGERFTCNATGRCVSQALRCNGEVDCDDESDETDCEQVDDRQDKCSTLLPIPG
AGRGTQGFNILTGEFVDHVLDPQYYGGQCEYVYNGEWRKLIYDPFCENLHYNEDEKNYRK
PYNFHTYRFMAQATSEGSSEYYEDMATLLKARKTEDSFNLGVTVGIQYVEFGVSGNVESE
LLTNLTKYTNQELGFIRLQSKVQTAQFKMRSEGLMLHEDMYLSLMELPEEKYDFGLYSRF
LNTYGTHYVTQGIMGGTLEYVAVVNTTAMKTSKIDAEQLKGCLGGSIGISSPIGKTKQVE
VGGKLEVKGCKGTGSYEKEMYGSSSLIKDIVTLVKGGSTGSSGGLLAIKDPDTYRKWGLS
LKYNPNLIEFETLPIFELVRLSTAGDHVGARPAHLRRAWEEYLLQFNSCRCAPCRHDGIP
VLSQTSCHCICKQGFRGEACEETLRKGSTTDGAWSCWGAWSSCQSGSKTRRRSCDNPQPD
GGAACLGSSSQNQRC
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagctcattttcatcaaggagctcttttatttctaatatgaatagactgatatgtgta
ttattgggctcctacattctgctgctggttttaaacaaatctctcactgtagatgcaacg
gagtactcatggaatatggctgaaaccagaacagggcaatctgctattaggagggtcagg
agtgtaaacaaaccagctcctatcaactgtaagatgaaaatgtggtcgtcatggacccct
tgtgactcctgcacagacaagaagtttcgtttccgttacgtggagaaagcgtcccagttt
ggtgggagacaatgtttggacagtcagtgggaagagctggcatgccccacagcacaggca
gtgtgttgggaaccagacatctgtggagaaagattcacctgcaatgccacaggtcgttgt
gtgagccaggcgcttcgctgtaacggtgaggtcgactgtgacgacgagtctgatgagacg
gactgtgagcaggtggacgacagacaggacaagtgttccacactactacccatccctgga
gctggccgcggcactcagggctttaacatactgacaggagaatttgtggaccacgttctt
gacccacaatactatggaggacagtgtgaatatgtctacaatggagaatggagaaaactc
atctatgatcccttctgtgagaatttacattataacgaggatgagaaaaactatcgtaaa
ccctacaacttccatacataccgcttcatggcccaggctacttctgaaggctcctcagag
tattatgaagatatggccacattactgaaagccagaaagacggaagattcttttaatctg
ggtgttactgttgggattcagtacgtggagtttggagtatcagggaatgtggagtctgag
ttactaacaaatctaacaaaatacaccaatcaggaacttggcttcatcaggttgcagtct
aaggttcagacggcccagtttaagatgaggagcgaggggctgatgcttcatgaagacatg
tacctgtccctcatggagcttcctgaggagaagtatgactttggcctgtactcccgcttc
ctcaacacttacggaacgcactacgtcacccagggcatcatgggagggaccctggagtat
gtggcggtcgtcaacacaaccgccatgaaaacgtctaagattgatgcggaacaacttaaa
gggtgtttgggtggatccattggcataagcagtcctataggcaagacgaagcaggtagaa
gttggaggcaaacttgaagtcaaaggttgcaaaggcactggctcttatgaaaaagagatg
tatggcagctccagtttgatcaaggacattgtgacgctggtgaaggggggcagtacagga
agtagtgggggtctgctggccatcaaggaccctgacacatacaggaagtggggcctttct
ctcaagtacaacccaaatctcatcgagtttgagaccctgcccatatttgagctggtgcgt
ctgagcacagcgggggaccacgtgggggcacggccggcccacctgaggagggcgtgggag
gagtacctgctccagttcaactcctgtcgctgtgctccctgcaggcatgacggcatccct
gtcctctcccagacctcctgccactgcatctgcaagcagggcttcagaggggaagcctgc
gaggaaaccctcaggaaaggttccacgacggacggggcctggagttgctggggggcgtgg
tcttcctgtcagtcaggaagtaagacgcgccgacggtcatgtgacaacccccagccagat
gggggcgccgcctgccttggctcctcctcccagaaccaacgctgttga
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