Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386496
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Entry
139386496 CDS
T10872
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03271
Virion - Rotavirus
ocla04145
Phagosome
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04514
Cell adhesion molecules
ocla04530
Tight junction
ocla04810
Regulation of actin cytoskeleton
ocla04820
Cytoskeleton in muscle cells
ocla05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139386496
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139386496
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin beta subunits
139386496
CD molecules [BR:
ocla04090
]
Proteins
139386496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139386496
NCBI-ProteinID:
XP_070988166
LinkDB
All DBs
Position
28:complement(17092057..17124465)
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AA seq
804 aa
AA seq
DB search
MDVKLLSIATLLGILCFCSAQQEGSDCIKANAQSCGECIQVAEKCGWCTDADFLKQGESK
SARCDELKSLITKGCSKAKIENPRGSISIDKDKPVTNRKKDVAEKLKPDQITQIQPQKLS
LNLRSGEAQTFKLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQEITSDF
RIGFGSFVEKTVMPYISTTPARLLNPCTSNENCTSPFSYKNVLKLTENGQQFNSLVSKQQ
ISGNLDSPEGGFDAIMQVAVCGDAIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SSNSSNVIKLIIDSYNSLSSEVILENNKVPEGVSIKYKSICKNGVVGTGENGRKCSNISI
GDEVSFDITIESQKCPSQGKSETIRIKPLGFNEDVEIVLNFICECECSKGGEPLSKICHN
GNGTFECGACRCNEGRIGRLCECSTDEVRTDDLDGNCRKDNGTDICSNNGDCVCGTCECK
KRENPEERYSGKFCDCDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTSTC
LAANKQICNGRGTCECGVCKCTNPKFQGPTCEICPTCPGVCAEHKECVQCRAFETGEKKD
TCQRDCSYFNLIRVKDRDKLPQPADQSYPLSHCKERDANDCWFYYTYAVRNDTMREVYVV
ETLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQ
ENPIYKSPINKFQNPSYGRKGVVL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagctactttctatagcaacattattaggaatcctatgtttctgcagtgca
cagcaagagggcagtgattgcatcaaggcgaatgcacaatcatgtggggaatgcatccag
gtggcagagaaatgtggatggtgtacagacgctgacttcctgaagcagggagagtctaag
tcagctcgctgtgatgagctgaagtccctgatcacgaagggctgcagtaaggccaagatc
gagaacccccggggcagtatctccatcgacaaggacaagcccgtcaccaaccgcaagaag
gacgtggccgagaagctgaagcctgaccagatcactcagatccagccccagaaactcagc
ctcaacctccgatctggtgaggcccagacgtttaagctgaagttcaagcgggcagaggac
taccccatcgacctctactacttgatggacctctctttctccatgaaagacgatttggag
aacgtcaagaacctggggactgacctgatgcgtgagatgcaggagatcacgtcagacttc
aggattggtttcggctcatttgtggagaagactgtgatgccctacatcagcaccacccca
gccaggctgttgaacccctgcacgagcaatgagaactgcaccagccctttcagctataag
aacgtgctcaagttgaccgagaatgggcagcagttcaacagcctggtcagcaagcagcag
atctctggaaacctggactcccctgagggaggctttgatgccatcatgcaggtggcggtc
tgtggggatgccattggctggaggaacgtcactcgtctgctggtgttctccactgacgct
gggttccactttgctggagacggcaaactgggcggcatcgttctgcccaacgatggaaag
tgtcacctggaaaacaacatgtacaccatgagccattactacgactatccctccattgcc
catttggtccagaaactgagcgacaacaacattcagacaatttttgcagttactgaggaa
ttccagccggtttacaaggaactgaagaatctcatccccaagtcagcagtaggaaccctg
tcctccaactccagcaacgtcatcaagctcattatcgattcttacaattctctttcatct
gaagtcattctggagaacaacaaggtgcctgaaggtgtgtccataaaatacaagtccatc
tgcaagaatggcgtggttggtacgggagagaacggaagaaaatgctctaacatctccatt
ggagatgaggtgtcctttgacattaccatcgagtcccagaagtgcccatctcaaggcaag
tcagagaccattaggatcaagccgctgggtttcaatgaggatgtggagatcgtcctcaac
ttcatctgcgaatgtgaatgttccaaaggcggagaacctctcagcaagatctgccacaat
ggcaacgggacctttgagtgtggagcctgcaggtgcaacgaaggacgtatcggcagactg
tgtgagtgcagcacagacgaggtgaggacagacgacctggacggtaactgtcggaaggac
aacggtacagacatctgcagcaacaacggagactgtgtgtgtggaacttgtgagtgtaag
aagagagagaaccccgaggaacggtacagcgggaaattctgcgactgtgacaacttcaac
tgtgaccgctccaacaacaaactctgtggaggacatgggcgttgtgagtgcagggtgtgt
atctgcgatgccaactacacaggcagcgcctgcgactgttccctggacacctccacctgc
ctggcagccaacaagcagatatgtaatggccggggcacctgcgagtgtggcgtctgcaaa
tgcaccaaccccaagttccagggccccacctgtgagatctgccccacctgccccggagtc
tgcgctgagcacaaggagtgtgttcagtgccgggcctttgagactggagagaagaaggac
acgtgtcagagggactgcagctatttcaacctgatcagagtgaaggatcgggacaagctg
ccccagccagccgaccaatcctaccccctatcccactgtaaggagagggacgccaacgac
tgctggttctactacacctacgccgtcaggaacgacacaatgagggaggtctacgtggtc
gagactctggagtgcccagcgggccctgacatcatccccatcgtggctggcgtggtggcg
ggcattgtgctcattggcctggccctactgctcatctggaagctgctcatgatcatccac
gaccgcagagagttcgccaagttcgagaaggagaagatgaacgccaaatgggacacgcaa
gagaatcctatatacaagagccctataaataagttccagaatccaagctatgggcgtaaa
ggcgtggtcctataa
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