Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386550
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Entry
139386550 CDS
T10872
Name
(RefSeq) nicastrin-like isoform X1
KO
K06171
nicastrin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139386550
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Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
139386550
NCBI-ProteinID:
XP_070988297
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Position
28:complement(32193077..32202323)
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AA seq
699 aa
AA seq
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MVLESSKWVMFIVGWLFKNVSCNAVAQKIYVELNNTVPCVRLLNATHQIGCQSSISGDTG
VIHVLESEADLEWPLSKGPNPPYMVLLESSLFTKSIMMKMKNASSRVAGVVVVPKTSQPE
FSPHTTCPNENTGVYTETYDHNLAHCNTTVWNPRGNGLSYEEFDFPVFSLKEDNETEVIK
QCYFDHNRVVNGSGLQYPLCAMQLFSHMHAVTDTATCMRRSSMDFSTSPVMVCDPLGGYN
VCAFIRPYNSTTFGHKENESVVIAAARLDSRAFFLEDSTGAEGSVSGFVTLLAAAQALRE
ATQEAPPTRNILFAFFHGEVFDYIGSSRMVYDMKNNMFVIDLDNVHSILEIGQVAVRSGT
NLFLHSDPVSRRNNTVHDEVTNLVKNLQSSTAGLNLSFVETGFSQPLPPSSFQRFLRARA
IPGIVLADHQTDFNNRYYESFYDNAAHLNLTYPSNLSPEEQLEFVTDTAKSLTEVATAVA
RALFKQAGGNNSQVNKINADPKTVTQMLYGFLVRSNNSWFQAVMAPELKDILQPNPPQYY
VGVAKSSHQANALTYLVQYLLANLTGTATNLTQSQCKKPDELPNESTYLYSYLWVQGVVP
PNSTQRESFCVRTAVRLVKAVSPAFDLGDYVSKEYSTWTKSQWKFIKARIFLVASRDLEM
LTLGVGVAVLFTSLLVTYFVSTKADVLFSSVREPNNAAY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggttttggaatcatcgaaatgggttatgttcatagttggttggcttttcaaaaatgtg
agttgtaacgctgttgcgcagaagatttatgtcgaactgaataacactgtaccatgcgtc
cgactgctcaatgctacacatcagattggctgccagtcctcgatatcaggtgatacaggg
gtgatccatgtcttggagtctgaggcagatctggaatggcctttgagcaaaggacccaat
cctccttatatggtcctgttggagtcatccctcttcaccaagtccatcatgatgaagatg
aagaatgcctccagcagggtggcaggggttgtggtggtcccaaaaactagccaaccagag
ttctcgccacatacgacatgtcccaatgagaacacaggtgtttacacggaaacctatgat
cataatttagcgcactgtaacacgactgtatggaatcctcgggggaacggtctatcctat
gaggaatttgacttccctgtcttctccctgaaagaagacaatgaaacagaggtcatcaaa
cagtgctactttgatcataatcgtgtggtgaacggcagtggcctgcagtaccctctgtgt
gccatgcagctcttctctcatatgcatgctgtcactgacactgcaacctgcatgagacgc
agcagcatggacttcagcacctccccagtgatggtgtgtgaccctcttggtggttataat
gtgtgtgctttcatccggccttataacagcaccacctttggtcacaaggagaacgagagt
gttgttatagcagcagccaggctggacagcagggcatttttcttggaggattctacagga
gcggaggggagtgtctcagggtttgtcactctgctggctgctgcccaggcactacgtgaa
gccactcaggaagcccctcccacacggaatatcctctttgccttcttccacggggaagta
tttgactacattggcagctctcgaatggtttatgacatgaagaataacatgtttgtgata
gacctggataatgttcactcaatactggagattggacaggtagcagtgcgcagtggcacc
aacctatttcttcactcagaccctgtgtccaggaggaacaacaccgtccatgacgaggtt
acgaatcttgtaaaaaacttacagtcctccacggctggtctcaacttatcatttgttgag
acaggtttttctcaaccactcccgccctcctcctttcagcgtttcctccgagctcgggca
attccagggattgttcttgcagaccatcaaacagatttcaacaataggtactatgagagt
ttttatgacaatgctgcccacctgaacctgacttatccatctaacttgagtccagaggaa
cagctagagtttgtgactgatactgcaaagtctcttaccgaggtggctactgctgttgcc
cgcgctctcttcaagcaggctgggggaaacaactcccaagtaaacaaaatcaatgcagac
cccaaaacagtgacccagatgctgtatgggtttctggttagatccaacaacagctggttt
caggcagtgatggccccagaactgaaggacatcctccagcccaacccaccccagtactac
gttggtgttgccaagtcgtcccatcaggctaacgcactgacctatctggtccaatatctc
ctggctaatttaacgggaacagccaccaacctcacccagagccagtgcaagaagccagat
gagctgccaaacgagagcacatatttgtactcttatctctgggttcagggcgtggtccca
cccaacagcacccagagggagtctttctgcgtacgcacagcagtacgcctggtcaaggca
gtgtcccccgctttcgatctgggggattacgtttccaaagaatattccacatggacaaaa
tcgcagtggaagttcatcaaagctcgaattttcctagtagccagccgggacctggagatg
ctgaccttaggcgtgggagtggccgtgctgttcacatcgctactggtcacatactttgtc
agtaccaaggcagatgtcctcttcagctccgtcagggaacccaacaacgccgcatactga
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