Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386563
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Entry
139386563 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF19A-like isoform X1
KO
K11972
E3 ubiquitin-protein ligase RNF19A [EC:
2.3.2.31
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139386563
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
139386563
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
139386563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-C3HC4
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139386563
NCBI-ProteinID:
XP_070988320
LinkDB
All DBs
Position
3:complement(2871238..2944202)
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AA seq
831 aa
AA seq
DB search
MMNLQKHQTMGSDRDLQSSSSVSLPSVKKAPKKRRLSMGNLFRRRRDPKRKSMELHGEGG
VDGIASIDSIHSDLTLNDKNSAFSVAGAACTSSLGASSSSSSSSSRGRELLECPLCLLRH
SRDSFPDIMTCHHRSCADCLRQYLRIEISESRVNISCPECSERFNPHDIRIILGDQPLME
KYEEFMLRRWLVTDPDCRWCPAPDCGYAVIAFGCASCPKITCGREGCGTEFCYHCKQLWH
PNQTCDAARQQRAQSLRLRTFSSSSLSYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHM
TCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGRKPWSRKKKILWQLGTLVGAPVGIALIA
GIAVPAMIIGIPVYVGRKIYNRYEGKDISPHRRNLVIVGGVTLSVIMSPVVAAVSVGIGV
PIMLAYVYGVVPISLCRSGGCGVSTGNGKGVRIEFDDENQMTAGSGAQATVSSDTTSVAD
TRNNPSIGEGSVGGMTGSLSASGSHVDRMGAMRDNLSENASTMALAGASITGSLSGSAMV
NYLNRLEVQADVQKERCSLSGESATFSLGTISDNASTKAMAGSLLNYRDGTSMEVQVDIE
PGKSAGQLHDHAMDDGRDAGRCGWSCHSGCPSEGQDGTAKSSSSSSGKKSKSKLKKGGGC
KIQETREDMDARLLEQQSTNSSEFDSPSLSGSLPSVADSDSSHLSEFSGGSALEITKTSC
GHGSSSDYHSRFATVSPLPEVEGDRLEALPSPRGVLSQPHSPVSSPCPEVSVSPRCLIAE
ENINQVCPTKADCDCITGGALPVGQLLQENNNNLQARPSSLFQTSCIQTDI
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacctccagaagcaccaaaccatgggctctgaccgggaccttcagtcctcctcc
tcagtcagcctgccctccgtcaagaaggcccccaagaagagacgtctgtccatggggaac
ctgttcagacggcgccgagaccccaagaggaagtccatggagctccatggagaaggaggg
gtggatggtatcgccagcatagacagcatccactcagacctcacgctgaatgataagaac
tctgccttctcagtggccggagctgcctgcacctcctccctcggggcgtcctcctcctcc
tcctcctcttcctcccggggtcgagagctgctggagtgccctctgtgccttctacgtcac
tctagggacagtttcccggacatcatgacctgccaccaccgctcctgtgcggattgcctg
cgccagtacttgcgaatagagatcagtgagtcgcgcgtcaacatcagctgtccagagtgc
tctgagcggttcaacccccacgacatacgcatcatcctgggagaccagcccctcatggag
aagtacgaggagttcatgttgagacgatggctggtgaccgaccctgactgtcgatggtgc
cccgccccagactgtgggtatgcagtcattgcctttggctgtgccagctgtcctaagatc
acgtgtggacgtgaggggtgtggcacggagttctgttaccactgtaagcagctgtggcac
cccaaccagacgtgtgatgcggcccggcagcagagagcccagagcctgaggctacgcacc
ttcagctcctcgtctcttagctacagccaggagagtggtgctgcagccgatgacatcaag
ccctgtccgcgctgcgctgcttacatcatcaagatgaacgacggcagttgtaaccacatg
acctgcgccgtctgtggctgtgagttctgctggctctgcatgaaggagatctctgacctg
cactacctgagcccgtcaggatgtaccttctggggcaggaagccgtggagcaggaagaag
aagattctgtggcagctgggcacgctggtgggcgctccggtgggcatcgctctgatcgct
ggcatcgccgtccccgccatgatcataggcatccctgtgtacgtggggaggaagatctat
aaccgctatgaggggaaggacatctctcctcacaggaggaacctggtgatagtaggagga
gtcactctgtctgtcatcatgtctcctgtggtggcagccgtctctgtcggcatcggcgtg
cccatcatgctggcgtacgtgtacggcgtggtgcccatctctctgtgtcgcagcgggggc
tgtggggtctccactggtaatgggaaaggagtccgcatcgagttcgatgacgagaaccag
atgaccgcagggagtggggcgcaagctactgtctcctcagacacgacctctgtggcggac
accaggaacaaccccagcatcggagaaggtagcgtggggggcatgacgggcagtctgagt
gccagcgggagccacgtggaccggatgggcgccatgagggacaacctgagtgagaacgcc
tccaccatggccctggctggagccagcatcaccggatctctgtctggcagcgccatggtc
aactacctgaacaggttggaggtccaggctgatgttcagaaggagaggtgtagtctgagt
ggagagtcggccaccttcagcttggggaccatcagtgacaacgctagcaccaaagcaatg
gctggatcccttctcaactacagagacgggaccagtatggaggtgcaggtggacatagag
ccgggtaagtccgctggtcaactacacgaccacgctatggatgatgggagagacgctggg
cgctgtggctggtcctgccactctggatgcccctcagagggccaggatggcaccgccaag
tcctcctcctcttcctcggggaagaagagtaaaagcaagctgaagaagggaggaggctgt
aagatccaggagacgagggaggatatggacgctcgtctcctggagcagcagagcaccaac
tcctcagagtttgactctccctccctcagcggctctctgccctccgtagccgactctgac
tcctcccacttgtcagagttcagcggcggctctgccctggagatcacgaagacgtcctgc
ggccacggatcctcgtctgactaccacagccgcttcgccacagtcagccctctgcctgaa
gtagagggagaccggctggaggcgttaccctcaccccgaggtgtcctctcccagcctcac
tccccggtctcctcgccctgtcccgaggtgtccgtctccccaaggtgtctgatagcagag
gaaaacatcaaccaggtgtgtcctacgaaggcagattgtgactgtattacaggaggagcc
cttcccgttggacagctgctgcaggagaacaacaacaacctgcaggcccgtccctccagc
ctgttccagacctcctgtattcagactgacatctga
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