Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386610
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Entry
139386610 CDS
T10872
Name
(RefSeq) paired box protein Pax-3-like
KO
K09381
paired box protein 3/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139386610
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139386610
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_32
HTH_23
Homeobox_KN
HCV_capsid
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
139386610
NCBI-ProteinID:
XP_070988418
LinkDB
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Position
28:complement(16953433..16986757)
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AA seq
491 aa
AA seq
DB search
MTALAGGIPRMMRPNPHQNYPRGGYSLEVSTPLGQGRVNQLGGMFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGSIGGSKPKTTTPDVDKKIEEY
KKDNPGMFSWEIRDKLLKDGICDRNNIPSVSSISRIMRCKFGGVGGEDEEDDDEIQKREL
EENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFSAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SSLQPYQLSDTPYPPTSISQTVSEQHSTVHRPQPLPPTSVHQGGLGSSVGTQDGSSAYCL
SSGRHGFSGYSDSFVPPPGHSNPVNPSISNGLSPQVMGLLNPGGVPHQPSHQSDFALSPL
TGGMEPGGGMAASCHGSQRGLEGLPGLTSMPTLPNSQSYCPPTYSSPAYAMDHHPSYQYG
QYGQSKVPFII
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacagcactagcggggggcataccgaggatgatgcgcccgaacccacaccaaaactac
ccgcggggaggctactctctggaagtctctaccccgttaggccagggccgggtgaaccag
ctcggtgggatgtttatcaacggcagacccctgcccaaccacatccgccacaagatcgtg
gagatggcccaccacggcatccgaccctgtgtcatctcccgccagctccgagtctcccat
ggatgcgtgtccaaaatcttgtgccggtaccaggagacaggctccatcaggcccgggtcc
atcggaggcagcaaacccaagacaacaaccccagatgtggacaagaagatcgaggaatac
aagaaagacaacccgggcatgttcagctgggaaatcagggataaattactcaaagacggg
atctgcgacagaaacaacatcccctcagtgagttcaatcagccgtatcatgcgttgtaaa
ttcgggggagttggaggagaagatgaggaggacgatgatgaaatccagaaaagggaattg
gaagagaacgaaagacgagcgaaacacagcatcgacggcatcctcggggatagatccagc
cactcagatgagggttcggacgtggactccgagccgggcctgccactaaagaggaaacag
cgtcgcagtagaaccaccttctcagccgagcagctggaggagctggagagagcctttgaa
cgaacacactaccctgatatatacaccagagaagagctagctcagagggccaaactcaca
gaagccagagttcaggtgtggttcagcaacaggagagccaggtggaggaaacaggcagga
gccaatcagctaatggcatttaatcacctgatccccggcggtttcccaccttcggccatg
tcgagcttgcagccatatcagctgtcagacaccccctaccctcccacctccatctcacaa
acagtgtcagagcagcacagtacggtccacaggcctcagcctctcccccccacctcggtg
caccagggtgggcttggctcctcagtggggacccaggacgggagttcggcctactgcctg
tcctccggacgccacggcttctcaggctactcagacagctttgtgcccccccctggccac
tccaacccagtcaaccccagcattagcaacggcctctcaccacaggtgatggggctgttg
aacccgggaggagtgccccaccagcctagccaccagagtgactttgccctctctcccctg
actggtgggatggagcccgggggtggtatggcggccagctgccacggctcccagcggggc
ctggagggtctgccaggcctgaccagcatgcccaccctgcccaactcccagtcctactgc
ccgcccacctacagttccccagcctacgctatggaccaccacccctcataccagtatgga
cagtatggacagagcaaggtgcctttcattatctga
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