Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386644
Help
Entry
139386644 CDS
T10872
Name
(RefSeq) ski-like protein isoform X1
KO
K18499
Ski-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139386644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
Filament
betaPIX_CC
UBA_BRSK
Motif
Other DBs
NCBI-GeneID:
139386644
NCBI-ProteinID:
XP_070988495
LinkDB
All DBs
Position
28:complement(40673653..40716679)
Genome browser
AA seq
759 aa
AA seq
DB search
MASTQTSLKTPFKDLTSFKGNMKQLYRERIEDVPIKKRLMAEMNLKRRNLDPLPPLPWTP
KVKREAGEEQTQDREVDPGMTRSIEMDSRGEFQVCGAKALDLSPGLKHTLAAFTLSSARS
LGGPAAFSARSGHEASSSPGPGSYPGMAPLPSPPVLGGIPLLVPSDSSTELSHSLLEGES
ISCFAVGGEKRLCLPQVLNSVLRHFSLQQINSVCDELYVYCSRCDGEQLHILKVLGILPF
NAPSCGLITLTDAQRLCNALLRPGAVLPSEPITKLPGQELLKETEASFQVEHQCLGKCQG
LFVPQFYAKPESPCIQCVECQLLFSPQKFVMHSHKSPDKRTCHWGFDSAKWPCYLQLGRK
YLGTAEEPQLKQLLEDMKDKFHYNRTSDKKVVEEDGEVRRSSPPEPLASLNSKLADNDAA
SKVQGQAQATLVFPHIKEEPSHPSYNLYTYDKMVAPNVSLRDQPEVSSEVLGVLLKHHYS
RRLAHGHQDTAMGQYHTHTHLHASPPVANDAKSQQRVVSTADRDRQQPVSMETIPSNKSS
SAVAMTTSVAALGSKDVLSSVCEDDKERIVVEIVQMYSRQQEKLHSTLHNQLQLEMELEA
LRGGEAVRLQQLAAEQCELQSELEAVHTEHAHRLGQVREEQRELEHRLEQLRQQSCVCDN
THQEERYANQLAELRGRLDGAEADRDKLQEELRSERDAREKLERIISQLQQQMGQTASTS
ASFVTTGSPSPPPTPSSHTPHTEGHTAGPAEQQNGHAHK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggccagtactcagacgagtctgaaaaccccattcaaagacctgacctcgttcaagggc
aacatgaagcagctgtaccgtgagagaatagaagacgtgcccattaagaagaggctgatg
gctgagatgaacctgaaacgccgaaacctggaccctctgccccccctgccctggaccccc
aaggtaaagagggaggctggggaagagcagacccaggaccgggaggtggatccaggcatg
actagatcaatagagatggacagtaggggggagttccaggtatgtggagcgaaagcttta
gacctgagccccgggctgaaacacacgctggcagccttcactctcagcagcgcgcgctct
ctagggggcccagcagccttctcagcccgctctggccacgaagcatcctcctcccccggc
cctggttcctaccctggcatggcacctctaccctcccctcctgtgctgggaggtataccc
ctgctggtgcccagtgacagctccacagaactcagccactcccttcttgagggagaatcc
atctcgtgctttgccgtcggcggggagaagcgcctctgcctcccccaggtgctcaactcg
gttctccgccacttctccttgcagcagatcaattccgtgtgcgacgagctctatgtgtac
tgctcacgctgcgacggggaacagctccacatactcaaggtgctgggtattttacccttc
aatgctccgtcctgcggcctcatcaccttaactgacgcccaacgcctctgcaacgccctc
ctccgcccgggggctgtcctcccctccgaacccatcaccaagctacccggccaggagctc
ctcaaggagacggaggccagcttccaggtggagcaccagtgtctggggaaatgccagggt
ctgttcgttccccaattctacgccaagcccgagtcgccctgtattcagtgcgtggaatgc
cagctcctcttctctccgcagaagtttgtgatgcactctcacaagtcgccggacaagagg
acctgtcactggggctttgactcggccaaatggccgtgctacctgcagctggggaggaag
tacctgggaacggcagaggagccgcagctcaaacagctgttggaggacatgaaggacaag
ttccactacaaccgaaccagcgacaaaaaggtggtagaagaggacggcgaggtgagaaga
tcgtctcctccagaacctctagcttctcttaacagtaaactagccgacaacgacgcagcg
agcaaggttcaaggccaagcccaggctactctggtgttcccccacatcaaggaagagccc
agtcaccccagttacaacctgtatacatatgataagatggtggctcctaatgtgtctctg
agggatcagccggaggtcagctctgaggttctgggggtgctgctcaaacaccactacagt
aggagactggcccacggccaccaagacactgctatgggtcagtaccacacacacacacat
ctccatgcctctcctcccgttgccaacgacgccaagtctcagcagcgcgttgtttctact
gctgaccgggaccgccagcagccagtttccatggagaccatccccagcaacaagagttct
tctgctgtagcgatgaccacgtcggtagcggcgctggggagtaaagacgtcctgtcttcc
gtctgtgaggacgacaaggaaaggatcgtagtggagatcgttcagatgtacagcagacag
caggagaagctgcactccaccctgcacaaccagctgcagctagagatggagttggaggcg
ctgcgtggaggcgaggctgtcaggctgcagcagctggcagcagagcagtgtgagctgcag
agtgagctggaggcggtgcacactgagcatgcccacaggctggggcaggtgagggaggag
cagagggagttggagcacagactggaacagctgaggcagcagagctgtgtgtgtgacaac
acacaccaggaggaacgctatgctaaccagcttgcagagctgcgtgggaggttggatggt
gcggaggctgaccgggataagctccaggaagagttgaggagtgagcgggatgcccgggag
aagctggagagaatcatctctcagctccaacagcagatgggccagacggcctccacctcg
gcctccttcgtcactacagggagcccctctccgccccccaccccctcctctcacaccccc
cacacagagggacacaccgctggccctgccgagcagcagaacggccatgctcataagtag
DBGET
integrated database retrieval system
