Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386649
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Entry
139386649 CDS
T10872
Name
(RefSeq) fatty acid CoA ligase Acsl3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00061
Fatty acid biosynthesis
ocla00071
Fatty acid degradation
ocla01100
Metabolic pathways
ocla01212
Fatty acid metabolism
ocla03320
PPAR signaling pathway
ocla04146
Peroxisome
ocla04216
Ferroptosis
ocla04920
Adipocytokine signaling pathway
Module
ocla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
139386649
00071 Fatty acid degradation
139386649
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139386649
09143 Cell growth and death
04216 Ferroptosis
139386649
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
139386649
03320 PPAR signaling pathway
139386649
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ocla01004
]
139386649
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139386649
Enzymes [BR:
ocla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
139386649
Lipid biosynthesis proteins [BR:
ocla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
139386649
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of breast milk
139386649
Exosomal proteins of breast cancer cells
139386649
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
139386649
NCBI-ProteinID:
XP_070988509
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All DBs
Position
28:17026675..17053314
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AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFLPWYLLSGAGANLDRARRVKARSVSGRPAGPYR
ATNHEDGSQQKLVSSLHPGVDTLDKVMEHGAARFPEKNCLGTREVLSEEDELQPNGKVFK
KVILGEYQWMSYEETYKAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKDILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNMDAVQELGSRPDNMAVARRRPVPSDIAVIMYTSGSTGIPKGVMISHSNII
AGVTGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCCIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQITKGYK
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLICSEITLKDWEEGGYYSTDKPHPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLMALAEQRGLRGSWEEICNNPDMERDVLHIITEA
ALSAKLERFEIPRKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQEDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaagaggacatgaacccactgctgctgcaggtcttccgctcggttgtctgg
gtctactctgtcatcaccttcctgccctggtacctgctctcgggcgcaggagccaaccta
gaccgggcgcggcgggtcaaagcacggtcagtgagcggtcgcccggcgggcccttaccgg
gcgaccaaccatgaggatggtagccagcagaagctggtgtcttccttgcacccaggagtg
gacaccctggacaaggtgatggagcatggagcggccaggttcccagagaagaactgcctg
ggcacgagagaggtgctgagcgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggtgatcctgggggagtatcagtggatgtcgtatgaggagacctacaaggcagcagtg
tgttttggcagtgggctggccgcgctgggccagaggccacagtgtaacatcgccatcttc
tgtgagaccagggccgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccattgcccacggtttgaacgagact
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggacattctg
ttggaggtgcctcggctgcagcacatcatcgtggtggacagtaagccaaccagttggccc
ggcttcccccgcggcatcatggtccacaacatggacgccgtgcaagagctgggctccaga
cccgacaacatggcggtggcgcgccggcggcccgtgccctctgacatcgctgtcatcatg
tacaccagcggctccacgggcatccccaagggcgtcatgatctcccatagcaacatcatt
gcgggcgtcacaggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctgccactggcccatgttctggagctgagtgcagagatggtgtgtatctctcac
ggctgttgcatcggatactcctccccacagacgctagcagaccagtcgactaagattaag
aagggcagtaaaggagacaccagtgttctaaaacctacactcatggctgctgtaccggag
atcatggatcgcatctataagaatgtgatgaccaaggtggaggagatgagcagtgtgcag
agaaccctctttgtgttggcctacaactacaagatggaacagatcaccaaaggctacaag
accccgctctgtgacagtctggtgtttaggaaagtgcgctcgttgctggggggtcacatg
agggtgctgttgtcaggcggagcgcccctctccgctgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcaccgagacctgcggagctggcacc
atcagcgagatgtgggactacagcacaggccgggtcggcgctcctctgatctgctccgag
atcaccctcaaggactgggaggagggcggttactacagcacagacaagccacacccgaga
ggggagattgtaatcggcgggcccaacgtgactatgggttactacaagaacgaggtgaag
aaccgtgaggacttcttcgtggacagcaacggccagcgctggttctgtacaggcgacatc
ggggagtttcacccagacgggtgcctcaagattatcgatcgtaagaaggatctggtgaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgcgcctacgcaaacagtgaccagtcgtacgtgattggcttcgtg
gtgcccaatcagaagcagttaatggcgctggcggagcagcgagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggagagagacgttctccacatcatcacagaggcc
gctctgtcagccaaactggagcgctttgagattccgaggaagatccgtctgagtgcagag
ccttggacaccggagactggcctggtgaccgacgcattcaaactcaaacgcaaggagctc
aaatcccactatcaggaagacatcgagagaatgtacggtggcaagtaa
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