Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386650
Help
Entry
139386650 CDS
T10872
Name
(RefSeq) glutamate decarboxylase 1-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00250
Alanine, aspartate and glutamate metabolism
ocla00410
beta-Alanine metabolism
ocla00430
Taurine and hypotaurine metabolism
ocla00650
Butanoate metabolism
ocla01100
Metabolic pathways
Module
ocla_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
139386650
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
139386650
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
139386650
00430 Taurine and hypotaurine metabolism
139386650
Enzymes [BR:
ocla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
139386650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SHMT
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
139386650
NCBI-ProteinID:
XP_070988510
LinkDB
All DBs
Position
28:complement(22425828..22471335)
Genome browser
AA seq
582 aa
AA seq
DB search
MEGQQWNSEILDKLHSQNSIICGHIMDYLQLPESIIEHAKPGGQVLAESKHHRSSSDINP
PHTASDNTCSITKDFSCIYSKDLLPALSGEDTTKSFFQELVNILLSYVCKSFRRSSKVLD
FHHPHQLREGLEGFSLELPDQPENLEQLLVDCRDTLKYGVKTGHPRFFNQLSSGLDVIGL
AGEWLTSTANTNMFTYEVSPVFILMEEILLKKMQEIVGWSEEEGDGVFCPGGTMSNLYSV
LLARYHFFPEVKTKGMTALPRLILFTSAHSHYSVKKSAAVLGIGSENVVVVKCNDRGKMI
PAELESSILTAKDQGCVPFYVNATAGTTVYGAFDPLNAIADICESHGLWLHVDAAWGGGL
LMSNLHRVKLQGIERAWSVTWNPHKMMGAPLQCSAILVKKRGLLKDCNQMCAEYLFQTDK
HYDTSYDTGDKTIQCGRHVDVFKLWLMWKAKGSEGFESQVNKCLENAEHLFDKLKQRPDF
ELVFKSKPEHSNVCFWYIPPSLRNMSPGPERNRRLHGVAPKIKAKMMEQGMAMIGYQPLG
DKVNFFRCVFSNPATQTEDVDYLLEEIASLGHDICIRTETDL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcagcagtggaacagtgagatactggacaaacttcactcccagaactcaatc
atatgtggacacattatggattacttgcagctaccagaaagcataattgaacatgctaaa
ccaggtgggcaggttttggcagagagtaaacatcacagaagctcctctgacatcaaccct
ccacatacagcaagtgataacacctgcagcataaccaaggacttcagttgcatctacagc
aaagatctactccctgctctcagtggtgaggacacaaccaaaagtttcttccaagagctg
gtgaacattctcctcagctatgtctgcaagtcgttcagacggagctccaaagtcctggac
ttccaccaccctcaccaactcagagagggcctggagggcttcagtctggagctcccagac
cagcccgagaacctggaacaactcctggtcgactgcagggacaccttgaagtatggagtc
aaaacaggtcacccacgcttcttcaatcagctgtcatcaggtctggatgtcatcggtttg
gccggggaatggctgacatctactgccaacacaaacatgtttacatatgaagtgtcccca
gtgttcattctgatggaggagattctactgaagaagatgcaggagattgtgggttggtca
gaggaagagggggatggtgttttctgtccaggtgggaccatgtccaatctgtacagtgta
ctactggccagataccacttcttccctgaagtgaagaccaaagggatgactgctctgccc
aggctaatcctcttcacatcagcacatagtcattattcagtcaagaaatctgcagcagtc
cttgggataggaagtgaaaatgttgtggtggtgaaatgtaatgaccgggggaaaatgatc
cctgcagaattggagtcaagtatccttactgccaaagatcagggttgtgtcccattctac
gtcaatgccacagcaggcaccactgtgtacggagcctttgatcctctcaatgccatcgca
gacatctgtgagagccatggactctggctgcatgttgatgcagcctggggcggaggactg
ttgatgtccaacctgcaccgtgtgaaactacaagggattgaacgagcctggtctgtgact
tggaaccctcataaaatgatgggtgctccgctgcaatgctcagccatacttgtgaagaaa
aggggcctcttgaaagactgcaatcagatgtgtgctgaataccttttccaaactgacaag
cattacgacacctcttatgacaccggagacaagaccattcagtgtggcaggcatgttgat
gtcttcaagctctggctcatgtggaaggccaagggttcagaaggcttcgaatcacaggtc
aataaatgtttggaaaatgctgagcacttgtttgacaaactcaaacaaagaccagacttt
gaactggtcttcaaaagcaaacctgaacacagcaacgtctgcttctggtacatcccacca
agtctgaggaacatgtccccaggtcctgagaggaacaggagactccatggggtggcacca
aagatcaaagccaagatgatggagcaggggatggccatgattggctatcagccgctcgga
gacaaagtgaacttcttccgatgtgtcttctccaacccagccacacagacagaggatgtg
gactacctcttggaggagatcgcttctcttggtcatgacatctgcatcaggactgaaacc
gatttatga
DBGET
integrated database retrieval system
