KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386683
Entry
139386683         CDS       T10872                                 
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03030  DNA replication
ocla03410  Base excision repair
ocla03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139386683
   03410 Base excision repair
    139386683
   03450 Non-homologous end-joining
    139386683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocla03032]
    139386683
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139386683
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139386683
DNA replication proteins [BR:ocla03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    139386683
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     139386683
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     139386683
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139386683
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 139386683
NCBI-ProteinID: XP_070988588
LinkDB
Position
28:complement(7595591..7602715)
AA seq 351 aa
MGITKLADLIRSDAPGAISYKEICDYTGKVIALDTSIVLNQFRTAVPNLRLLGPLTGLFF
RTLTFLEHDIKPLFVFDGKPPGEKRAVLEKRAQVAGWSSPSHSGAVSPQTRDCLHLLKLM
GVPIIQAPGDGEALCAHLVKQGTVDAVASEDMDTLPFGGNILIRQLNAKKNSEVIEYSLP
KLLDILKITHDEFVDLCILLGCDYCDKITGLGPKRALTLIQQHRNIENVVLNINRKTHPV
PLFWQYQDARKLFLDAPLTELPNLVWTEPDEEALVHFLCHEKHVKEQRVRGRMQKFSEKR
ERLRKEREEDKAAGQSRQTRMEDFFRVTRKRQQPSETGDSIGTKEKRARPK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggtattacaaaactggcagatttgattcgtagcgatgcacctggtgccatttcttac
aaagagatctgcgactacacaggaaaggtcattgcgttggacacctccattgttctgaac
cagttccgcactgcagtaccaaatcttcggttactgggtcccttgacaggtttgttcttt
cgaacgctaaccttcctggagcatgacatcaaaccattgtttgtgttcgatgggaagcct
cctggagagaaaagggctgtgttggagaagagggcacaggttgcaggctggagctccccc
agtcattcaggagcagtgtcccctcagacacgggactgtctccaccttctgaagcttatg
ggtgtgcccatcatccaggctccaggagatggcgaggcactatgtgcccacctggtgaaa
cagggcacagtagacgcggtagcatcagaagacatggacactttgccctttggtggaaac
attctgatccgccagctcaatgccaagaaaaacagcgaagtcattgagtactctctgccc
aagctgctagacattttgaagataacacatgatgagtttgtggacctgtgtatcttgttg
ggctgtgactactgtgacaaaatcacaggccttggacctaagagagctctgactctgatc
cagcagcaccggaacatagagaacgtggtgctgaacatcaacagaaagacccaccctgtc
ccactgttctggcagtatcaggatgcccgcaagctgtttttggatgcccccctgaccgag
ctcccgaacctggtctggactgagccagatgaggaggccctggtccactttctgtgccat
gagaaacacgtcaaggagcaaagagtacgaggtcgaatgcagaagttcagtgagaagcgt
gaacgcctgaggaaggagagggaggaggacaaggcagcaggacagagccgacaaactcgc
atggaggacttcttccgtgttacacggaaaaggcaacagccgtctgaaactggggattcc
attggcaccaaagaaaagagagcgaggccaaagtga

DBGET integrated database retrieval system